| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4195 |
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| Symbol | |
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| ID | 5541706 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 5426755 |
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| End bp | 5428716 |
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| Gene Length | 1962 bp |
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| Protein Length | 653 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640896305 |
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| Product | DNA gyrase, B subunit |
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| Protein accession | YP_001434243 |
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| Protein GI | 156744114 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00698411 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATGAAC GATTCGAGTC GTCTATGACA ACAGAACCAC TGCGATCGGT CAATGCGACC
GGCTACGATG AAGATCAGAT CCAGGTGCTC GAAGGGATGG AAGCGGTTCG TCGCCGTCCC
GGCATGTATA TCGGTCCCAC CGATGTCAAT GGTTTGCATA CCATGGTGCG CGAAGTCGTC
GATAATTCGG TCGATGAGGT GATGGCGGGA CGCGCGACGA CCGTTGAGGT GACTATTCAC
GAAGATGGGT CGGTCACGGT CGCTGATGAT GGCTATGGTA TTCCGACCGG TCCCCATCCT
AAACTTGGTG TCAGCACCCT TCAGGTGGTG ATGACCGTGC TCCATGCAGG CGGAAAGTTC
GATAACAAAA GCTACAAGGT GTCGTCCGGG TTGCACGGCG TTGGCGTATC TGCCGTCAAT
GCCCTCTCTG CGTATATGCG CGTTGATGTC CATAATGCGC GCGATGGGAT GCACTACTAT
CAGGAGTACC GCTGTGGTGT GCCACAGTGC GAGGTGCAAA AGGTCGGTCC AACTACCCGG
CGTGGGACGA TTACGCGCTT TCTGCCGGAT ACGACGATTA TTCAGACGCT GGATTACAAC
TTCAAAACAC TGGCGCAGCG CTTCCGCGAG ATGGCGTATC TCAACAAAGG ATTGCGCTTC
AAGTTTGTCG ATGAGCGCGA TGGCAATGAG ATTAACTTTT ATTTTGAGGG CGGTATTCGC
TCGTATGTGC GCCATCTCAA TAAAGATAAG AATGTTCTGC ACAAGCACCC ATTCTATGTC
GAACGCACCA TCGATGAGGT AATGGTGGAA GTGGCGTTGC AATACACGGA AAGTTTCGAC
ACCGATTCGG TCTATGCATT TGCTAATGGC ATCAACAATA CCGACGGCGG TGCGCACGTC
GCCGGTTTTC GCAGCGCGTT GACGCGGGTG ATTAATGCGT ATGCGCGCAG CAAAGGGTTC
CTCAAGGAGA ATGAAGGAAA CCTGACCGGC GATGATGTGC GTGAGGGTCT TACTGCGGTG
ATCAGCGTCA AACTGCGCGA TCCGCAGTTC AGTTCGCAAA CAAAGGAGAA GTTGGTCAGC
CCTTCCGCAA CCGGCGCAGT CAACACGGTG TTCGGCGACG CCTTCAGCGC CTGGCTTGAG
GAGAATCCGC AGGAGGCGCG GCGGATTGTC GAGAAGTGCA TCTCGGCGGC GCGCACCCGT
ATCGCTGTGC AGAAGGTGCG CGAAACGGCG CGCAAGAGTG CCATGGAAGG GTTTTCGCTG
CCGGGCAAAC TGGCTGATTG CTCGGATACC AATCCGGCAC GCACGGAGTT GTTCATTGTC
GAGGGTGATA GCGCCGGCGG AAGCGCCAAA CAGGGGCGTG ACCGGCGCTA TCAGGCGATC
CTGCCGCTGC GCGGCAAGAT CCTGAATGTC GAAAAGAGCC GACTCGACAA GATGCTCTCC
AACAATGAGG TCAAGGCGCT CATTACCGCC ATCGGCGCCG GCGTCGGCGA TCAGTTCGAC
CCGTCCAAAC TGCGCTACCA TCGCATCATT CTGATGTGCG ATGCCGATGT GGATGGTAGC
CACATTCGCA CGCTATTGCT CACCTTCTTC TTTCGCTATA TGCGTCAGAT TATCACGAAT
GGGCACCTCT ACCTGGCGCA GCCGCCGCTC TATCGCATTG TGCACGGGAA GACTGAAAAG
TATGTCTTCA CCGATACAGA GCGCGATCAG TACCTGGCGA CTCTCTCGTC TGCGGAGCGC
AATAAGGCGG TTGTGACGCG CTACAAGGGG TTGGGTGAGA TGAACGCTGC GCAATTGTGG
GAAACAACAA TGAATCCGCT CAATCGCCTC CTCCTTCAGG TGACGCTCGA AGATGCGCAG
CAGGCGGACG AAACGTTCAC CATGCTGATG GGCGATCTGG TCCCGCCGCG CAAACGTTTT
ATTCAAACCC ACGCGCTCGA AGTGCGGAAT CTGGATATTT GA
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| Protein sequence | MNERFESSMT TEPLRSVNAT GYDEDQIQVL EGMEAVRRRP GMYIGPTDVN GLHTMVREVV
DNSVDEVMAG RATTVEVTIH EDGSVTVADD GYGIPTGPHP KLGVSTLQVV MTVLHAGGKF
DNKSYKVSSG LHGVGVSAVN ALSAYMRVDV HNARDGMHYY QEYRCGVPQC EVQKVGPTTR
RGTITRFLPD TTIIQTLDYN FKTLAQRFRE MAYLNKGLRF KFVDERDGNE INFYFEGGIR
SYVRHLNKDK NVLHKHPFYV ERTIDEVMVE VALQYTESFD TDSVYAFANG INNTDGGAHV
AGFRSALTRV INAYARSKGF LKENEGNLTG DDVREGLTAV ISVKLRDPQF SSQTKEKLVS
PSATGAVNTV FGDAFSAWLE ENPQEARRIV EKCISAARTR IAVQKVRETA RKSAMEGFSL
PGKLADCSDT NPARTELFIV EGDSAGGSAK QGRDRRYQAI LPLRGKILNV EKSRLDKMLS
NNEVKALITA IGAGVGDQFD PSKLRYHRII LMCDADVDGS HIRTLLLTFF FRYMRQIITN
GHLYLAQPPL YRIVHGKTEK YVFTDTERDQ YLATLSSAER NKAVVTRYKG LGEMNAAQLW
ETTMNPLNRL LLQVTLEDAQ QADETFTMLM GDLVPPRKRF IQTHALEVRN LDI
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