Gene Rcas_4032 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_4032 
Symbol 
ID5541542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp5230790 
End bp5231704 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content64% 
IMG OID640896144 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_001434083 
Protein GI156743954 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0492] Thioredoxin reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000393605 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000152914 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGGGAAC TTATTATCAT CGGCGGCGGT GCAGCGGCGC TTTCTGCCGG GATGTATGCG 
CTGGGCAAGC AGATCGATTT CGTGATGATC TATGAATCGT TGGGCGGCAA AGCCGGTTGG
CGGCAGAGCC TGGTTGGGCA GGAGGAGGTC GAATATCTGG CGGGCGAAGA AGCAGTCCGT
ATCTTCGAGC GCAAGATCGC CATGCAGTCG GATCGCGCGA TCCGTGATAC CGTCACGGCG
GTGCATCGCG CAGACCAGGG GTTTCGCGTC GAGACGCGCA ACCACGGCGC TCTCGATGCG
CTTGCCGTGA TTGTTGCCAC CGGCGCGACG CCGGTGCGCC TCAAAGCGCC GGGCGCCCAG
GAGTTGCTCG GTCAGGGGCT GGGCTACTCG GTCACCACCC ATGCGCACCT GCTGGCGGGG
AAGACGGCGG CGGTCGTGGG GGCGACGCAT CGGGCGCTGC GCGGGGTGGC CGAACTGGCG
CGCACGGCCG AAAAGGTCTA CCTGATCGTC CCTGAACTGC ACGATGTCTC ACTGCCGATG
ATGCATGCCG TCAGCCAGCG CCCGAATGTG GAAATCCTGG CAGGGTACAC CGTCGATGAA
GTCGTCGGCC CGATGAATGT CGAGGAGATT GTTGTCTCGC GCGCGGGAGA ACAGCGTCGG
ATCGCCGTCG ATGCGGCGTT CGTCGATCTG GGGTTGCGCC CGTGCAGTGA GATCGTGCAG
CACCTGGTGC GCACCGATCA GGACGGCTTC ATCTGGGTCG ATGAGCGCAT GGCGACGACG
GTTCCGGGTG TTTTCGCCGC CGGCGATGTG ACGACGGCGT TTGGTGAACA GGTGCTGATC
GCCATCGGCG ATGGAGCGCG CGCGGCGCTC AGCGCCTACG ACTATCTGCT TATGCGAATG
CCGGTTGCGC GGTAA
 
Protein sequence
MRELIIIGGG AAALSAGMYA LGKQIDFVMI YESLGGKAGW RQSLVGQEEV EYLAGEEAVR 
IFERKIAMQS DRAIRDTVTA VHRADQGFRV ETRNHGALDA LAVIVATGAT PVRLKAPGAQ
ELLGQGLGYS VTTHAHLLAG KTAAVVGATH RALRGVAELA RTAEKVYLIV PELHDVSLPM
MHAVSQRPNV EILAGYTVDE VVGPMNVEEI VVSRAGEQRR IAVDAAFVDL GLRPCSEIVQ
HLVRTDQDGF IWVDERMATT VPGVFAAGDV TTAFGEQVLI AIGDGARAAL SAYDYLLMRM
PVAR