| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4009 |
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| Symbol | rpsE |
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| ID | 5541519 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 5217017 |
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| End bp | 5217559 |
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| Gene Length | 543 bp |
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| Protein Length | 180 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640896121 |
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| Product | 30S ribosomal protein S5 |
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| Protein accession | YP_001434060 |
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| Protein GI | 156743931 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0098] Ribosomal protein S5 |
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| TIGRFAM ID | [TIGR01021] ribosomal protein S5, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000876107 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0000786108 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGATCAAGC GACGCATTCA TACGGATGAA CTTGAACTCG AAGAGCGCGT GGTGCAGATC
AACCGCGTCT CGAAGGTGGT CAAGGGCGGG CGCCGCTTCA GTTTCAGCAC CGTCGTCGTG
GTTGGCGATG GGAAGGGGCA CGTCGGCATC GGCATGGGGA AAGCCGCCGA GGTGCCGGAG
GCGATCCGCA AGGGAGTGGA AGCAGCCAAA AAGAACCTGA TCCGGGTGCC GCTTGCTGGC
ACGACCATTC CGCACGAGGT GCAGGAAGAG TTCGCCGCAT CAAAGGTGCG CCTGCTCCCG
GCTGCCCCCG GCGCCGGCGT GATCGCCGGT CGTGGTGTGC GCCCGGTGCT CGAGATGGCC
GGCATCAAGG ATGTGCTCTC GAAACGCTAT GGCAGCAATA ATCCGATCAA CGTGGTGAAG
GCGACGTTCA AAGCGCTCAG TTCGTTGACA TCACTCGAAG AGCAGGCACG TATGCGCGGC
ATGACGCCAA GAGAACTGCA CCTGCGGCGC ATGCGTCGCG AGCCGGCGTC GCAGGAGGCT
TAA
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| Protein sequence | MIKRRIHTDE LELEERVVQI NRVSKVVKGG RRFSFSTVVV VGDGKGHVGI GMGKAAEVPE
AIRKGVEAAK KNLIRVPLAG TTIPHEVQEE FAASKVRLLP AAPGAGVIAG RGVRPVLEMA
GIKDVLSKRY GSNNPINVVK ATFKALSSLT SLEEQARMRG MTPRELHLRR MRREPASQEA
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