Gene Rcas_3445 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3445 
Symbol 
ID5540944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp4499248 
End bp4499919 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content61% 
IMG OID640895563 
Productphosphoglycerate mutase 
Protein accessionYP_001433513 
Protein GI156743384 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0406] Fructose-2,6-bisphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0141958 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCT TCTACATCAT CCGGCATGGT CAGACCGATT GGAATCTCCA GGGACGCTGG 
CAGGGCAAGG CGGATATTCC GCTCAATGAA GCAGGACGTG CGCAGGCGCG GAGTCTGGCG
GGGCATCTTG ATCGCCGACG CATCTGTTTC GATGCCATCT ATAGCAGCGA TCTGCTGCGA
GCATGGGAGA CTGCAACGCT GATCGCGGAC AGGTTGAACG TTGAACCTAC GCCGCTGCCG
GCGCTGCGCG AGATTGACGT TGGCGCGTGG AGCGGGCTGA CCCGCGATGA GGTCGTGGCT
CGATTTCACG ATCTGTGGGA ACGGTTGCAC TCGGGTGAGG ATGTGCCGCG TGGCGGCAAT
GGTGAAACCT TCGGGCAACT CTATGACCGT GTCGTTGGCG CGGTTGAACG ATTGATACGC
GAGCAACCAG GACAAACCAT CGCCCTGGTG ACGCACGGTG GTCCGGCACG CGCGTTGCTG
CTCCATGCGG CGCGCGATAA GGTCGGCGTG TTGCCGCGCC CATTGCACAT CAGCAATACA
TCGTTGTCGG TTGTAGCGTG CACAGCAAAC GATTGGCGCA TCCTCGCAGT GAACGACACG
TCGCACCTCG ACAGCGCACG TGAAGCGCCT GATATGATGG AGACGCAAGT CGATGATGCG
GAGCGGGCAT GA
 
Protein sequence
MTTFYIIRHG QTDWNLQGRW QGKADIPLNE AGRAQARSLA GHLDRRRICF DAIYSSDLLR 
AWETATLIAD RLNVEPTPLP ALREIDVGAW SGLTRDEVVA RFHDLWERLH SGEDVPRGGN
GETFGQLYDR VVGAVERLIR EQPGQTIALV THGGPARALL LHAARDKVGV LPRPLHISNT
SLSVVACTAN DWRILAVNDT SHLDSAREAP DMMETQVDDA ERA