| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3057 |
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| Symbol | |
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| ID | 5540553 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 3960142 |
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| End bp | 3960822 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640895176 |
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| Product | SNARE associated Golgi protein |
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| Protein accession | YP_001433129 |
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| Protein GI | 156743000 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0398] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000815606 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAACATC TTCCAACCCG GGTTCAATCA TTTCTTCTCA GACCGCGCCG CCTGGTCGTT
GGCGCGCTGC TCGTGATTGT CGCCGGCGCG GCACTCTGGC TCTTCCGCGC GTCCGGCGCG
CTCCTGCATC CCATCTTTAT TCGTGACATG GCGCACTCGC TTGGTTTCTT CGGACCACCA
GCGTTGATCG GCGCGCTGGC ATTGCTGCTG GTTGCGCCTG TTGCACCAGC CGCCGTGTTG
CAGATCGGCG CCGGGCTGGC ATTCGGACCG GTGGCGGGGT TTCTGTACAC CCTGGTTGCC
GACCTGATCG GCGCCAGCGC CGGTTTCTGG CTCGCCAGAC GATGGGGGCG ATCGGTGATC
GAGCCGCGGT TGTCGCCTGC GATGCGTGAA CAGGTCGAGC GCCTGACACA GCGGATGACG
TGGCGCAGTG TCATGCTGTT GCGGCTGCTG CCGGGTCCCG CCTACCCGCT GGTATCATTT
GCGGCAGGGT ACTCGCGCCT TGGATTTGGC GCGTACACGC TGGCTTCTCT GGCAGGCGTC
TCCCCGGCGC TGGCGTTGCT GGCATTCGCC GGCGATCTGG CAACATATTC ACCACTACTG
GCGTTCGGGC TGGTTGCGCT GATCGTCGGA GCGCTGGCGC TCGCCGGGCG TCGGTTGAGC
CGTCGCATAC CGTCTGCGTA A
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| Protein sequence | MEHLPTRVQS FLLRPRRLVV GALLVIVAGA ALWLFRASGA LLHPIFIRDM AHSLGFFGPP
ALIGALALLL VAPVAPAAVL QIGAGLAFGP VAGFLYTLVA DLIGASAGFW LARRWGRSVI
EPRLSPAMRE QVERLTQRMT WRSVMLLRLL PGPAYPLVSF AAGYSRLGFG AYTLASLAGV
SPALALLAFA GDLATYSPLL AFGLVALIVG ALALAGRRLS RRIPSA
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