Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3042 |
Symbol | |
ID | 5540538 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 3942789 |
End bp | 3943814 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640895161 |
Product | inosine/uridine-preferring nucleoside hydrolase |
Protein accession | YP_001433114 |
Protein GI | 156742985 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1957] Inosine-uridine nucleoside N-ribohydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACGC GCGTCATTCT CGACACAGAC CCCGGCATCG ATGATTCGCT GGCCATTCTG CTGGCAGTCG CCTCCCCCGA AGTCGAGCTT GCAGGCGTTA CCGTGACGAG CGGCAACTGT CCGCTCGCCG ACGGCGTGCG CAATGCGCGC AATGTGCTGG CGCTCGCCGG TCGTTCCGAT ATTCCGGTGT GCGGCGGCGT GTCATTGCCG CTCATCCGAC CGCTCTACAC CGCGCCCGAA ACCCACGGCG AAAGCGGCGT CGGTTTTGCC CGCCCGCCGG AGTCGCCCGC CCCGCTCCAC AGAGAGAACG GTGTGGACCT GATCATTCGT GAAATCCTGG AGCATCCTGG CGAGGTGACG CTCGTGGCCG TCGCGCCGCT CACGAATGTT GCTATTGCGG TGCGCAAAGA GCCACGCATC ATTAATGCCG TGCGTGAGGT CATTATTATG GGAGGCGCGC TGCGCGCCGA TGGCAATACC ACCTCCCTGG CGGAGTTCAA TTTTTATGTT GATCCGCACG CCGCACATAT CGTTCTTGAA AGCGGTATGC CGATTACGCT GCTGCCGTGG GACATTACGC AGCACATTAT TCTCACGCAG GCGGATGTTG ATCGCCTGAA CCGCATCTCG TCGCCAATCA CCCGCTTCAT TGCCGATGCC ACTCGTTTCT ACATCGAGTT TCATCTGGCA GCCTTCGGAT TTGCGGGGTG CTCAATCAAC GATCCGGCGG CGCTGGCACT GGCGTTTCTG CCCGATCTGG CGCGCACCGA ACCAATGCAT GTGGCAGTCG AGTATACGAG CGAACTGACC GCCGGCAAGA GCGTCATCAG TTACATCGGA CCGGCGACCC GTGAGCCGGA TGCGCACGAC CTGACCGGCT ACGACACCGC CCGATGGCCA CCGCAGTGGC GACACGCATT CCGCCCGGCG CCAAACGTGC GCGCAGTCGT TGACTTCGAT ACGCAACGTT TTCTCAATCT CTTTGTCGAA CGCATGGAAC ACCTGGCACA GACCGTATCT GTATGA
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Protein sequence | MTTRVILDTD PGIDDSLAIL LAVASPEVEL AGVTVTSGNC PLADGVRNAR NVLALAGRSD IPVCGGVSLP LIRPLYTAPE THGESGVGFA RPPESPAPLH RENGVDLIIR EILEHPGEVT LVAVAPLTNV AIAVRKEPRI INAVREVIIM GGALRADGNT TSLAEFNFYV DPHAAHIVLE SGMPITLLPW DITQHIILTQ ADVDRLNRIS SPITRFIADA TRFYIEFHLA AFGFAGCSIN DPAALALAFL PDLARTEPMH VAVEYTSELT AGKSVISYIG PATREPDAHD LTGYDTARWP PQWRHAFRPA PNVRAVVDFD TQRFLNLFVE RMEHLAQTVS V
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