Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_2761 |
Symbol | |
ID | 5540247 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 3572589 |
End bp | 3573539 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640894887 |
Product | hypothetical protein |
Protein accession | YP_001432850 |
Protein GI | 156742721 |
COG category | [R] General function prediction only |
COG ID | [COG5006] Predicted permease, DMT superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.112871 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGACA CACTCGAACA GACCATTGAT CGTCCGGTCA CACGGTTGAC GCGTGCGCTG CCCTATCTGG TGCTCTTCGG CGGCGTTCTG ATCGCTGCCG CAGCCGCGAT CTTGATCCGC TACATCCAGG GTATGGAGGT TCCGTCCACC ACTATTGCTG CGGGACGCCT GGGGTTGGCG GCGCTTATCC TGCTCCCCAT TGCCTGGTCG CGCGCTGGCG ACGAGTTGCG TCGCCTGTCA CGACGCGACA TTCTGCTCGG GATTGTGTCC GGCGTGTTTC TGGCGGTTCA CTTTGCTGCA TGGATCTCAT CGCTGGCGTA TACGTCGGTT GCATCATCAG TGGCGTTGGT TTCGACCAAC CCGCTATGGG TGGCGCTCCT GTCGGCGGTG CTGCTGCGTG AGCGCCCATC ACTGCCGACG ATGACGGGTG TCGCGCTGAC GATTACGGGA AGCATTCTGA TCGGCATCAG CGACAGTAGC GGACCCGATA GCGGCAATGC GCTGTTGGGG AATATCCTGG CGCTTGTAGG CGCATTTGGC GGCTCGATGT ATTTCCTGGT CGGACGCAGC CTTCGCCGTC ATGTCTCGGT GCTGGCATAT ATCTGGCTGG TCTACACCAG CGCTGCGGTC GCACTACTGA TCACGGCACT GGCATTTGCC GGAACCGCCA ATCCACTGGA ACTCTTCGGC GGATACCCAC CCCTCGTCTA CCTGTTGCTC CTTGGTCTTG CCGTCGGACC ACAACTGCTC GGTCATACCG CCTTCAACTG GTCGTTGCGC TACCTTTCCG CCACATTCGT CACCGTCGCA CTGCTGGGGG AGCCGATCGG CTCGGCATTG CTGGCGCTGA TCCTTTTTGG CGAATGGTTT GCGCCGCTGC AACTGGCGGG CTTCGTACTG CTTCTGATCG GCATCGCAGT TGCGGCGCAG GGGGAGCGGA GCGGCAAATA G
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Protein sequence | MSDTLEQTID RPVTRLTRAL PYLVLFGGVL IAAAAAILIR YIQGMEVPST TIAAGRLGLA ALILLPIAWS RAGDELRRLS RRDILLGIVS GVFLAVHFAA WISSLAYTSV ASSVALVSTN PLWVALLSAV LLRERPSLPT MTGVALTITG SILIGISDSS GPDSGNALLG NILALVGAFG GSMYFLVGRS LRRHVSVLAY IWLVYTSAAV ALLITALAFA GTANPLELFG GYPPLVYLLL LGLAVGPQLL GHTAFNWSLR YLSATFVTVA LLGEPIGSAL LALILFGEWF APLQLAGFVL LLIGIAVAAQ GERSGK
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