Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_2294 |
Symbol | |
ID | 5539775 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 2960847 |
End bp | 2961806 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640894427 |
Product | hypothetical protein |
Protein accession | YP_001432395 |
Protein GI | 156742266 |
COG category | [S] Function unknown |
COG ID | [COG4636] Uncharacterized protein conserved in cyanobacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.24692 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.213826 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCATA CGACTATCCA CCCCCCGCGT CCATCCGAAC CGCCACCATC CGATGACCCG TTCCGCTATG GGTGGCGCTT TGTGCTACGT CCGACCCCCG ACGATCCCCA TCACCTTGAA CAGGTTCCGC TTACGCTGGA AGATGTCCTG CACCCTGAAA CGGGAGATTT CATCGTGCAC AGCGATCGCC ACGAGACCGA CCGGATGTAC CTCACTGCTG TGCTGCGCGC GCGCCTTGAG GGGGCGGGAG CGGCCATTGT CCTGAGCGAT GTGCGTATCG CCTGGGATAT TCCCGACTTG CGCCCGCACG GACCGGACGT GATGGTGATA CCGGGCATCG TGGAACGCCA AAACTGGAGC ACATTCGATG TAGCGGTTGA AGGCGCGCGT CCGGCGCTGA TCATCGAAAT CACCTCGCCG GAAACGCGCG AGAACGACCT GGAGCGCAAG GTAGAGCACT ATGCGCGAGC AGGAGTAGCG CAGTATGTGA TTGTGGACGA CACAGGTCGC GGTCGGGAGC GACATCTGCG CCTGCTCGAC TATCGGTTGG AGGCGGGGGC ATATCGGTTG CACCCGCCAG ACGCGGCAGG GCGAGTGCAT CTGGTGATTG CCAACCTGTG GCTGGGTATC GAGCGGGATC ACGTCGTCTG CTACAACGAG CGCGGCGTTG CGTTCGGCGA CTATGCAACG GTGGTGCGGC AGGCAACTGA AGCCGAAGAA CGCGCGCAGC GAGAAGCCGT AGCGCGCGAG GCCGAAGCGC AGGCGCGACG CGAAGCCGAG AAACGTGCGC AGCGAGAAGC CGTAGCGCGC GAGGCCGAAG CACAGGCGCG GCTTGCAGCC GAGGAACGCG CGCAGCGAGA AGCCGTAGCG CGCGAGGCCG AAGCACAGGC GCGGCTTGCA GCCGAGGAAC GGCTGCGCGC TCTGGAAGAA GAATTGCGCC GCCTGCGCAA CAATGCGTAG
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Protein sequence | MTHTTIHPPR PSEPPPSDDP FRYGWRFVLR PTPDDPHHLE QVPLTLEDVL HPETGDFIVH SDRHETDRMY LTAVLRARLE GAGAAIVLSD VRIAWDIPDL RPHGPDVMVI PGIVERQNWS TFDVAVEGAR PALIIEITSP ETRENDLERK VEHYARAGVA QYVIVDDTGR GRERHLRLLD YRLEAGAYRL HPPDAAGRVH LVIANLWLGI ERDHVVCYNE RGVAFGDYAT VVRQATEAEE RAQREAVARE AEAQARREAE KRAQREAVAR EAEAQARLAA EERAQREAVA REAEAQARLA AEERLRALEE ELRRLRNNA
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