Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_2009 |
Symbol | |
ID | 5539487 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 2575835 |
End bp | 2576266 |
Gene Length | 432 bp |
Protein Length | 143 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640894144 |
Product | CBS domain-containing protein |
Protein accession | YP_001432115 |
Protein GI | 156741986 |
COG category | [R] General function prediction only |
COG ID | [COG0517] FOG: CBS domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.416479 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGAACACA AACGTGTCAG TGATGTCATG CACTATGGCG TTATTTCGTG CCGGGTCGAA ACGCCGGTCG AGGAGGCGCT GGCGCTTATG CAAGAGCACC GCATCCACGC ACTCGTGATC GTTGATGGAC CTGGCTACCT TGCCGGGATT GTGTCGCAGA CCGACCTGCT GCGGGCTTGG AAGGAAGGGT CGTCGTTTGA AGCGGTGATG CGCGGACCGG TCGGCGACAT TATGACCCGC AGTGTTGTCA CCTGTATGCC CGAAATGGAA CTCGACCGCG CTATTCAGTT GCTCAATCGC AATCATATCC ATCGCCTCGT CGTTGTCGAA GAGCGCAACG ATGGGCGCTT CTGGCCCATA GGCGTGCTGT CGATGACCGA CATTGTGCGC GCACTAGAGG GCGAAGGGCT TGGTATGGGA CGTTCATCGT AG
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Protein sequence | MEHKRVSDVM HYGVISCRVE TPVEEALALM QEHRIHALVI VDGPGYLAGI VSQTDLLRAW KEGSSFEAVM RGPVGDIMTR SVVTCMPEME LDRAIQLLNR NHIHRLVVVE ERNDGRFWPI GVLSMTDIVR ALEGEGLGMG RSS
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