| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1949 |
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| Symbol | |
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| ID | 5539427 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 2498638 |
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| End bp | 2499564 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640894085 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_001432056 |
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| Protein GI | 156741927 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1216] Predicted glycosyltransferases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.535237 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCGTCGC TCGCAATTGT CATTGTCAGT TACAACACAT GTGATCTGCT GCGCGCGTGT
TTGCGCTCTC TCCAGGAGAA TGACGCGCAT CACGCAGTCA GCATCTGGGT GGTCGATAAT
GCCTCGACCG ACGGAAGCGT CGCAATGGTG CGCGCTGAGT TCCCCTGGGT GCGCCTGATC
GTCAGTCCGC GCAACGGCGG TTTTGCCTAT GCCAACAATC TGGCGATCCG TGCGATCCTC
GACGAAGCGG GTCTGGCGGC AGCGCCCCAT GGAGCGTCGG GCGCCGATTA CATTATGCTC
CTTAACCCGG ATACAATTGT GCCGCATGGC GCACTTGACG GGTTGACCGC ATATATGGAA
ACACATCCTG ATGTTGGCGC CTGCGGACCA AAGTTGCTGC TGCCCGATGG CTCGCTCGAC
CTGGCATGCC GGCGTTCGTT CCCGACGCCA GAAGTCGCAT TTTACCGGAT GATCGGTCTG
TCGCGCCTGT TCCCGCGCCA TCCACGTTTT GCGCGCTACA ATCTGACCTA TCTGGACGAG
AATAGTGAGG CGGATGTGGA CGCGGTGGTG GGTGCGTGTA TGCTGGTGCG TGCCAGTGTC
GCGCGCGAGG TTGGTCTGCT TGATGAGGCG TTCTTTATGT ACGGCGAAGA CCTTGATTGG
GCATATCGCA TGAAGCAGTA CGGCTGGCGC ATCAGATATG TTCCATCGGT TACGGTGTAT
CACCACAAAC GCGCATCGAG TAGCCAGCGC CCGGCGCAGA CGATCCGCTG GTTCTATGAT
GCAATGCGCA TCTTTCATCG CAAGCATTTC GCCGCCACCA CGCCAGCGTT GTTCAATGCC
GTGATCGAAG CCGGTATTAC GCTGAAGGAG TATCTCAGCC TTGGCAGCAA TTTCCTCCGC
CCCCCGATCG GGCGCCGCGT CGGGTAA
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| Protein sequence | MPSLAIVIVS YNTCDLLRAC LRSLQENDAH HAVSIWVVDN ASTDGSVAMV RAEFPWVRLI
VSPRNGGFAY ANNLAIRAIL DEAGLAAAPH GASGADYIML LNPDTIVPHG ALDGLTAYME
THPDVGACGP KLLLPDGSLD LACRRSFPTP EVAFYRMIGL SRLFPRHPRF ARYNLTYLDE
NSEADVDAVV GACMLVRASV AREVGLLDEA FFMYGEDLDW AYRMKQYGWR IRYVPSVTVY
HHKRASSSQR PAQTIRWFYD AMRIFHRKHF AATTPALFNA VIEAGITLKE YLSLGSNFLR
PPIGRRVG
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