| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1266 |
|---|
| Symbol | |
|---|
| ID | 5538738 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | - |
|---|
| Start bp | 1636476 |
|---|
| End bp | 1637348 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640893404 |
|---|
| Product | F0F1 ATP synthase subunit gamma |
|---|
| Protein accession | YP_001431381 |
|---|
| Protein GI | 156741252 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0224] F0F1-type ATP synthase, gamma subunit |
|---|
| TIGRFAM ID | [TIGR01146] ATP synthase, F1 gamma subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.849524 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCAGTA CCCGTGAAAT CCGGCGTCGT ATTCGCTCGG TGAAGAACCT GGCGCAGATC
ACGCGCGCGA TGGAGATGGT GTCGGCGTCG AAGATGCGCC GCGCGCAGCG GAATGTGCTC
GCCACCCGCC CATATGCCGA CCGTCTGCTC GACGTGATGG GCGAATTGAC CGGGCGGGCG
GTCGGGATGC GGCGTGGCAC TCTGCTCGAA GTGCGCCCCG TGGTAAAGGG CGTCGCGCTG
ATCGTCGTCA CGCCTGATCG CGGCCTGGCG GGCAGCCTGG TTGCCAATGT GCTGCGGCGC
GCGTCGCGCT TCATTCTCGA TGAGCAGGAG AAGAAGCATA CGGTCGAAGT GCTGGCGATT
GGCAAAAAGG GACGCGATTT CATGGTGCGC ACGCGCCAGA ACCTGGTCGC TGAGGTGACC
AAACTCGGCG ATTACCCGCG TCTGACGGAT ATTCTCGGCA TTGCGACGAA TGTCATCAAT
GGCTTCCTGA GCGGGCGGTA CGATGAGGTG TACGTGCTGT ACAGTCAGTT CGTCAATACG
CTGGTCCAGC GCCCGACGAT CAAACGGTTG CTGCCAATCG ACCCGCCGCA CGAACCGGCG
GAACGCATGG TCGATTATAC CTACGAGCCG AGCCAGGAAG AAGTGTTGCG TGCATTACTG
CCGCGTTTTG TTGAAGTGCA ACTCTATCAG GCAGTGCTGG AGGCGATTGC CAGTGAGCAC
AGCGCGCGTA TGGTGGCGAT GCGCAACGCG ACCGATAACG CCAAGGAGTT GCAGCGCGAC
CTGACCCTCT CGTACAATAA GACGCGCCAG GCGAATATTA CGAAGGAAGT CTCCGAGATT
GCGTCGGGTG CGGCAGCCCT GGCGGAGATG TGA
|
|---|
| Protein sequence | MPSTREIRRR IRSVKNLAQI TRAMEMVSAS KMRRAQRNVL ATRPYADRLL DVMGELTGRA
VGMRRGTLLE VRPVVKGVAL IVVTPDRGLA GSLVANVLRR ASRFILDEQE KKHTVEVLAI
GKKGRDFMVR TRQNLVAEVT KLGDYPRLTD ILGIATNVIN GFLSGRYDEV YVLYSQFVNT
LVQRPTIKRL LPIDPPHEPA ERMVDYTYEP SQEEVLRALL PRFVEVQLYQ AVLEAIASEH
SARMVAMRNA TDNAKELQRD LTLSYNKTRQ ANITKEVSEI ASGAAALAEM
|
|---|
| |