Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_1185 |
Symbol | |
ID | 5538651 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 1529321 |
End bp | 1529899 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640893317 |
Product | hypothetical protein |
Protein accession | YP_001431300 |
Protein GI | 156741171 |
COG category | [S] Function unknown |
COG ID | [COG2210] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.491301 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.832453 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGAGA CAACGATTGA GCGCGAGCGT GAGACTGCCG CGCTGCTCGA CAGAATTGCC GCACTCGAGG CGCGCGTTGC TGCGCTTGAA GCGCATCCTA CACAGGGCAT TGAAGATCGT CTGGCGATGG TCGTCTTCTC CGGCGACCTG GATAAAGCCA TTGCTGCGCT GATCATTGCG ACCGGCGCAG CGTCGATGGG GCTGGAAACC TCGATGTTCT TCACCTTCTG GGGCTTGAAT GCGGTCAAGA AACAGAAGAT ATTCGCCGGA AAGAACCTGC TGGAACAGGG CTTCACAGCG ATGCTGCCCG GCGGGTTGGG GCAGATGGGA CTGTCACAGA TGAACTTCTT CGGCGCCGGC GCGCAGATCA TCCGCAAGTT GATGCGCGAC CACGGCGTGA TGTCGGTCGA GGAACTTTTC GATCTGGCGC GCGAACTGGG GGTGCGCATG GTCGTGTGCG ACATGTCGCG CGAACTGCTC GGCGTACACG ACGATGAGTT GGTCGATGGA CTGGAGCACG GTGGCGTGGC GACATTCCTC GGCGACGCAA CCCGCGCTAA AGTGACGTTG TTCATCTGA
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Protein sequence | MTETTIERER ETAALLDRIA ALEARVAALE AHPTQGIEDR LAMVVFSGDL DKAIAALIIA TGAASMGLET SMFFTFWGLN AVKKQKIFAG KNLLEQGFTA MLPGGLGQMG LSQMNFFGAG AQIIRKLMRD HGVMSVEELF DLARELGVRM VVCDMSRELL GVHDDELVDG LEHGGVATFL GDATRAKVTL FI
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