| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1059 |
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| Symbol | |
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| ID | 5538525 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 1375556 |
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| End bp | 1376758 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640893195 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001431178 |
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| Protein GI | 156741049 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.543295 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGCGT ATCTTGTTCG ACGCTTGATC CAGATGGTGA TTGTCACTGT CCTTTCGGCG
ATGCTCGGCT ATTCGTTGTT GTACCTTGCG CCGGGAGGAC CATTGTTGTT TTTGCAGCAG
ATGCAGAACA CCGGGCAGCG CCGGGTGACA GAAGAAGATA TTGCGCGCCT GAAAGCGCGG
TATGAACTTG ACCTCTATTT GCCCATCCGC TTTACCCGCT GGCTGATCGG CTTCCCCGCC
GGTCCAATCC AGGTCGGCGG CGTGAACCTG ATCTCGCCGG ATACAGTGGT TGGGTGCGCT
ATCCCCGGTC AGGTGCGCCT GCGTTACCCC GATGGCACGG TCGAAATCCG GGAAGAAGGG
TGTGTGCGTG ATGTGACCCT GGCAGACCTG GCCGAGCGCC GCACTAGCCG CGGTATTCTG
TTCGGCGATT TCGGGTTATC GCAGCAGATC GCGCGCGACC GTCCGATCAG CGATCTGTTG
ATGACCCGCT TGCCCTACAC GATCCAGTTG ATGGGCGTCT CGACGCTGCT GGCGATTCTG
ATCGGTGTGC CGATCGGCAT CTATTCGGCG GTGCGCCAGT ATTCACGCTT CGACTATGCA
ATGACCGGTA TTACGTTCGT TGGCTCGTCG CTGCCGACTC TCTTCATGGG TGTGATGGCG
ATTCTGATCT TTTCGGTGCT GGCAAAGGAC GCCGGGTTGC CGTACCTGCC ATCCGGCGGT
GCGCAGGGTA TTCGTAACTA CGATATTCCC TGGATTGGCA CGGTGCAGGC CGGTTCGACG
CTGGATCGCA CCCTGCGCTT TATCATGCCG TGCGCGGTGT TGACTTTCTT CAATATCGCC
GCCTGGAGCC GTTTCATTCG CTCCAGTATG CTCGAAGTGC TGCGGCAGGA TTATGTGCGC
ACAGCGCGCG CCAAAGGCGT GCGGGAACGC GCGGTGATTA CCAAGCACGC GCTGCGCAAT
GCGCTGATCC CGTTTGTGAC CCTGCTTGCG GGTGTGTTGC CGACGCTGGT GGCCGGCGCG
GCGATTACCG AATCGGTGTT CAACTGGCCC GGCATGGGGC GATTGCTGGT CGATGCGCTG
GGACGTAGCG ACTACACGGT GGCAATGGCG ATCCTGTTCA TCAGTACAGT TCTGGTGTTG
ATCGGATATC TCATCTCCGA TATTCTGTAC ACGGTCGTCG ATCCGCGCAT CCGTCTCGCG
TGA
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| Protein sequence | MTAYLVRRLI QMVIVTVLSA MLGYSLLYLA PGGPLLFLQQ MQNTGQRRVT EEDIARLKAR
YELDLYLPIR FTRWLIGFPA GPIQVGGVNL ISPDTVVGCA IPGQVRLRYP DGTVEIREEG
CVRDVTLADL AERRTSRGIL FGDFGLSQQI ARDRPISDLL MTRLPYTIQL MGVSTLLAIL
IGVPIGIYSA VRQYSRFDYA MTGITFVGSS LPTLFMGVMA ILIFSVLAKD AGLPYLPSGG
AQGIRNYDIP WIGTVQAGST LDRTLRFIMP CAVLTFFNIA AWSRFIRSSM LEVLRQDYVR
TARAKGVRER AVITKHALRN ALIPFVTLLA GVLPTLVAGA AITESVFNWP GMGRLLVDAL
GRSDYTVAMA ILFISTVLVL IGYLISDILY TVVDPRIRLA
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