Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0813 |
Symbol | |
ID | 5538279 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 1069540 |
End bp | 1070145 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640892965 |
Product | hypothetical protein |
Protein accession | YP_001430948 |
Protein GI | 156740819 |
COG category | [S] Function unknown |
COG ID | [COG4636] Uncharacterized protein conserved in cyanobacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00107511 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACTGTAT CAGACCTCCG CGACACTCTT CCCGTCGTTG CCGTCGCCAC ACCGATGATC GGACCACCGC AGGGTCGCTG GACATACGCC GACTATGCGG CGCTGCCGGA AGACGGAAAC CGCTACGAGA TCATTGCGGG AGTGCTCTAC ATGATGCTGG CGCCAGAAAT TGAACATCAG ATGACCAGCA ATCGTATGGC AACATTTCTG ACGATCCACA TCCAATTTAC CGGTCTTGGC GCGGTTCTGA CTGTGCCCAC TGATGTCGAA CTGGCGCTCG ACACTGTGGT TCAGCCCGAT ATTGTCGTTG TTCTGAGCGC CAATCTCGGC ATTATCACCC GTAGTCGCAT CATTGGCGCG CCCGATCTGG TTGTGGAAAT CCTCTCCCCC GGCACAGCGG GGTATGATCG GCGCGAGAAG CAGGATGCGT ATGCGCGCGC TGGCGTGCAT GACTATTGGG TTGTTGATCC GGCGGCGCAG ACTGTGGAGG TGCTTACTCT GGATCGGAGC GCCTACCGCT CGCGCGGCGT CTTTCGCGGG CAGGCGCGCT TACCGTCGCA GACGGCGCCG TTGCCGATTC CGGTCGAGCG GTTCTTTCAG GAGTGA
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Protein sequence | MTVSDLRDTL PVVAVATPMI GPPQGRWTYA DYAALPEDGN RYEIIAGVLY MMLAPEIEHQ MTSNRMATFL TIHIQFTGLG AVLTVPTDVE LALDTVVQPD IVVVLSANLG IITRSRIIGA PDLVVEILSP GTAGYDRREK QDAYARAGVH DYWVVDPAAQ TVEVLTLDRS AYRSRGVFRG QARLPSQTAP LPIPVERFFQ E
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