Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0579 |
Symbol | |
ID | 5538042 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 771521 |
End bp | 773257 |
Gene Length | 1737 bp |
Protein Length | 578 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640892740 |
Product | peptidoglycan glycosyltransferase |
Protein accession | YP_001430726 |
Protein GI | 156740597 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0768] Cell division protein FtsI/penicillin-binding protein 2 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.22857 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGATC GGCTTCGAGC ACGGATCGAC TGGTTTGCCG GCGCGCTTGG GGTTCTTATC CTGGGCAGCG GATTGTTCAT TGCCAGCGTC ATGCAGTGGC GATTGCACCT GCTCGCCGGT CTGTGGCTGC TCTCGCTCCC GGCGCGGCGT CTCATCGGGC GCTACAGAGC CACAGCGGAT CGGAGCCTGC GCGGCTTGAT GGTGATGGCA GTGTTGGGGT TTGCGGCCAT TGGGCTGCAA CTGGCGCGCA ACCAGGCGAC GCAATCGGAG GCGACGCTGC GCGCCGTGGC ATCGCTGGCG CAACCGGTTG CTTCCGAACC ATCGCAGCCG ATCTTCCCCG AAACTGACCC TGCCGAACGC ACGTCGTTGG GGAGCGGACG CGCCTTTCCT GTTGTCATCA ACGCTGGCAT GCGCGGACGC ATCGTGGACC GCAACGGCGT CGTGCTGGCA GAAACCGTCG ATGGTCGGCG CACCTATCCG AACCCTGCGC TTGGGCATCT GATCGGCTTT CAGAGCCGCC TCTACGGAAC CACCGGGCTG GAAGCGCGCT TCGATGCCCA ACTCTCCGGC GTGGCAACTC TGTCGCCAAC CGCCATTCTC GAAGCGCGCC TGCTGGGATC GCCGGTCGAA CAGGTTCCTG CCGACCTGAC CCTCACGCTA GACAGTCGCT TGCAGGCGGC GGCGCAACAG GCGCTCGGCG AGCGAGCGGG AGCCGTGGTG CTCCTCGATG TGCCGACCGG CGCGATCCTG GCGATGGTGA CGTACCCGCG CTTCGATCCC AATCAACTCG TGCTGCCCGA ACCGGTGACG CAGGCGGATG TGGACCGGGT GCAGGCGGCA TGGGCAGAAC TGAACGCGCG TGCCGATGCG CCGCTGCTCA ACCGTGCCAC GCAGGGGCGC TACCCTCCCG GATCGGTGAT CAAAACGCTG ACTGCCGCCG CCGCGCTCGA TAGCGGGGTC TTGGCAGATC CATCGGCGCC CGTCACCTGC CCGAATCTGT TGCCGACCGA AGCCGGCGCA CCGCCGGTGC GCAACGCGGT TGATAACCTG TTCCGTCGCA CCGGCGACCC CTCCGATCTG GTGCGCGTCT ATGCTTTCTC ATGTAACACC GCCTTTGCGC AGGTGGGATT GTCGCTTGGC GCAGACCGCT TCCTCGAGTA TGCGCGCCGT TTCGGATTGC AGACGGCTGA TACCCGCTCA GGACCTGCCG ATCTGCGCGA CATTCCGGCA GAAATCGGCA CGATTGCGAA TGACGCATCA TTTCTGCAAC GTCCTGCGGC GTTGGCGGAC ACGGCATTCG GGCAGGGGCA GGCGCTGGTC ACACCGCTCG ATATGGCGCA GATGGCGGCG TCGATTGCCA ACGACGGACG CCTGATGCGA CCGTATCTGG TTGCCGAAGC GCGCGCCGGC GAGCGTGTCA TCTATCAGGC GCAACCTGAA ATGGTGCGGC AGGTAGTGTC GCCGGAGACC TCGCGGCGCA TGCTCGACAT GATGCGCATC TCCGTCGAAA TCGGGTATGC GCAGCCGATT GCGCTGCCGG GGGTCAGCAT CGGCGCGAAG ACTGGCACTG CCGAGACGCC GCGCGGTGTG CCGCACTCCT GGATCGTCGC GGTGGCGCCG GTGGAACAAC CGCAGTATGC GATTGCCGTC ATTGTGGAAT ATGGCGGCGA AGGCAGCCGT TCAGCACTGC CGGTGGCGCG TCAGGTGTTG GCGGCGGCGT TGGGGGTGAC GCCATGA
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Protein sequence | MTDRLRARID WFAGALGVLI LGSGLFIASV MQWRLHLLAG LWLLSLPARR LIGRYRATAD RSLRGLMVMA VLGFAAIGLQ LARNQATQSE ATLRAVASLA QPVASEPSQP IFPETDPAER TSLGSGRAFP VVINAGMRGR IVDRNGVVLA ETVDGRRTYP NPALGHLIGF QSRLYGTTGL EARFDAQLSG VATLSPTAIL EARLLGSPVE QVPADLTLTL DSRLQAAAQQ ALGERAGAVV LLDVPTGAIL AMVTYPRFDP NQLVLPEPVT QADVDRVQAA WAELNARADA PLLNRATQGR YPPGSVIKTL TAAAALDSGV LADPSAPVTC PNLLPTEAGA PPVRNAVDNL FRRTGDPSDL VRVYAFSCNT AFAQVGLSLG ADRFLEYARR FGLQTADTRS GPADLRDIPA EIGTIANDAS FLQRPAALAD TAFGQGQALV TPLDMAQMAA SIANDGRLMR PYLVAEARAG ERVIYQAQPE MVRQVVSPET SRRMLDMMRI SVEIGYAQPI ALPGVSIGAK TGTAETPRGV PHSWIVAVAP VEQPQYAIAV IVEYGGEGSR SALPVARQVL AAALGVTP
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