| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0125 |
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| Symbol | |
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| ID | 5537585 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 149995 |
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| End bp | 152340 |
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| Gene Length | 2346 bp |
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| Protein Length | 781 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640892290 |
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| Product | hypothetical protein |
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| Protein accession | YP_001430279 |
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| Protein GI | 156740150 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1262] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.871876 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCTGCGC GGAACAGGAG CAGTTCCGCG CCATCGTCGC TTGCCGATCT GGCGCGCGCG
CCGCGCGCGC GGCTGGCGCT CGAAGGGAGC GCCGGCAGCG GAAAGAGCAT GGCTGTGCGC
TGGCTGGCGC TGGCATGCGC TGCTGCCGTG GCAGGGGAAC CGGAAGGCGC AGCGACGATC
TTCGCCGACT GGATGCCGCC GGCGCCGCTG CCGGTGCTGC TCGAGGCGTC TGCATTCGTC
GCCGCCGCCG AGCCATGGTC GCTGATCGAG GCACAGTTGT CCGCCAGCGG TCTCGCCGCC
TTTGCCGGAT CGGTGCATCA GGCGCTGCTC AACGGCGAGG CGCTGATCGT GATCGAGGAC
GTGACACCGC GTTCTATCGC CATGGTCACG CAGATCGTCG CAGCGTTCCC CGCCAACCGC
TCTATCTGCA CCTGCCGCCC TCATACGAGC ACTAATTCCT CGCCTGCACA TCTCCTTCAG
GCGCACGGGT TCCAGTTGGT CCACTTTGCC CCCCTCGAAC GCGCCCAGGT CGATACACTG
GTTGAACGCC TGCTGACCGC CATGAATCGG CGACGGGCGG TGCGTGAGGT GAGCGGCGCG
GCGCCGTCGG CAATGCTGCG AAGCGGGACG ATTGCCGAAC AGATCGCCGA TCTCCAGGGA
CGCCTGCTCA TCGACGATGG ATTGCGGGCG TTGACATTCG AGCCGCTGGC GGCGGCGATT
GCGGTGGCAG TTGATGCTGG CGGTCACACC CTCCCGGCAG CGCGCGCCCG CGTCTACCAA
CAGGTCATTG CGGCGCTGTG GGGCAATGAT GCGCTGCCGC CAACCGTGCT GGCGCCGCTG
GCGCTGGCAA TGCAACGCGC CGCGCATGAT GATGGACGCT CAGGCGCTCT GATGCGCCCG
GATGTTGAAC GATTGATCCG CGAAGGCGTG CCCGATGCTG ATGAGTCGCA GATTGCAGCG
GTGATCGAGC ATGCATTCGA AACCGGTTTG CTCGACATTA CGACGAGCGA GACGCTCCAA
CCTGCGTACC ACATGCCTCA GATGGGATTG CGGGCGTTCC TGGCGGCGCG CGCCCTGGCG
CACGCCGAAG ATTTCGATGC GATCATTGCG CGCTATGCCG ATGATCCTGC ATGGCGCGAG
ACGCTCACGC TCGCTGTCTG GCAGCGGATG AATGCTCTTC CGGCAGATGA CGGACAGGGA
CAGGGCGCGG ATCTTTCCAT CTTCCGGCAC TTGCTGGACC GATCAGAACA TGGCAAACAG
GACAGAGATG AGCGTTCGGC AAAGAAAAAA CCATCACGGC GCGCGCCAAA ACCCATCCCC
GTTCCGCAAC ACGGCGCCGG CGCGTCCGCC ATCGCTCCAG CACAGGCGAC GCTGCTGGCA
GCCGCCTGTC TGGAAGCAAT CGAAGCGCAA CGCTACCCGG ATATCCTGCG CGATGTGCAG
CAGCGCCTGC TCGCAATGGT TGCCGATCCT GCGGTTGCTG TGGAGGATCG CGTGCTTGCC
GGGCTGATGC TCGGGCGCCT GGGCGATCCA CGGTTTGAGT CTCTGCTGCC GCCGTTGGCG
CAGATCGATG CCGGCGTCTT TGTGTATGGC ACGAATGATG CCCCCTACAG CGAGGAAGGA
CCGGCGCAGC GCATCGATCT GCCTGCCTAT CAGATTGGCG TCTATCCGGT CACGAATGCG
GAGTACGCCC GTTTCCTGGC AGCGCGCCCT GGACATCCCA AACCGCACTA CTGGTACGAT
CCACGCTTCA ACAATCCCTC GCAGCCGGTC GTCGGCGTGA CCTGGCACGA TGCTGTGGCG
TATGCTGCGT GGCTGACCCG CGCCCTGGCA GCCGAAGGGC GCCTCCCTAC CGGTATGGTG
GTGCGGCTGC CGCTCGAAAC CGAATGGGAA AAAGCCGCTG TATGGGGTCC CCGCGCGCGC
GTTAAGCGTC GCTTCCCATG GGGCGATCAG TGGGTTGCAG GCGCCGCCAA TGTCGCCGAA
ACCCGCGTCG GACCGGATGG CAAGTCGCGC TGGGCAACGA CGCCGGTGGG GTGCTTCCCA
GGCGGCATCA GCCTCTATGG CGTGCATGAT CTGATCGGGA ATGTCTGGGA ATGGACGGCG
AGCAGCACCG AAGCAGCGCC TGGACGCGGC GCTGCAACAG GGCAGCGCAC CGCTCTGTCA
CGCCTCTACG GCGATCCATC AGGAGCGCCG ATGCAACGCC ACCATTATGT GTTGCGCGGA
TCATCGTTCA ACTCAACGAC TGCCCACGCG CGGGCCACCT ACCGCGGCAG CCACCTCCCG
CCGGATTACT GGCGCTACAA TATTGGCTTC CGGATCGTCA TCGCGCGTCC TATAGCCGGG
GAATGA
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| Protein sequence | MPARNRSSSA PSSLADLARA PRARLALEGS AGSGKSMAVR WLALACAAAV AGEPEGAATI
FADWMPPAPL PVLLEASAFV AAAEPWSLIE AQLSASGLAA FAGSVHQALL NGEALIVIED
VTPRSIAMVT QIVAAFPANR SICTCRPHTS TNSSPAHLLQ AHGFQLVHFA PLERAQVDTL
VERLLTAMNR RRAVREVSGA APSAMLRSGT IAEQIADLQG RLLIDDGLRA LTFEPLAAAI
AVAVDAGGHT LPAARARVYQ QVIAALWGND ALPPTVLAPL ALAMQRAAHD DGRSGALMRP
DVERLIREGV PDADESQIAA VIEHAFETGL LDITTSETLQ PAYHMPQMGL RAFLAARALA
HAEDFDAIIA RYADDPAWRE TLTLAVWQRM NALPADDGQG QGADLSIFRH LLDRSEHGKQ
DRDERSAKKK PSRRAPKPIP VPQHGAGASA IAPAQATLLA AACLEAIEAQ RYPDILRDVQ
QRLLAMVADP AVAVEDRVLA GLMLGRLGDP RFESLLPPLA QIDAGVFVYG TNDAPYSEEG
PAQRIDLPAY QIGVYPVTNA EYARFLAARP GHPKPHYWYD PRFNNPSQPV VGVTWHDAVA
YAAWLTRALA AEGRLPTGMV VRLPLETEWE KAAVWGPRAR VKRRFPWGDQ WVAGAANVAE
TRVGPDGKSR WATTPVGCFP GGISLYGVHD LIGNVWEWTA SSTEAAPGRG AATGQRTALS
RLYGDPSGAP MQRHHYVLRG SSFNSTTAHA RATYRGSHLP PDYWRYNIGF RIVIARPIAG
E
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