Gene Rcas_0088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0088 
Symbol 
ID5537547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp110552 
End bp110863 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content49% 
IMG OID640892253 
ProductDNA polymerase beta subunit 
Protein accessionYP_001430243 
Protein GI156740114 
COG category[R] General function prediction only 
COG ID[COG1669] Predicted nucleotidyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0340868 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGTGC AAACCAGAGA GCAGATTTTA GACCTGTTGC ACCAACATCG AGAGGAGTTG 
CGGCGTCTGG GGATCAGACG CTGCGGTATT TTTGGTTCAT TTGTAAGAAA TACTCCGCAC
GACGAGAGCG ATGTCGATAT TCTGGTCGAG TTTCAGCCTG GTCAGAAAAC GTTCGATAAT
TTTATGCACC TCGCGTTCTT TCTCGAAGAT CTTTTCGGGC GAAGGGTTGA ATTGGTCACA
ACCGAATCAC TCAGTCCCTA TATCGGTCCC GCCATTTTGT CGGAGGTTGA GTATGCCTCC
ATCGACACGT GA
 
Protein sequence
MTVQTREQIL DLLHQHREEL RRLGIRRCGI FGSFVRNTPH DESDVDILVE FQPGQKTFDN 
FMHLAFFLED LFGRRVELVT TESLSPYIGP AILSEVEYAS IDT