| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0063 |
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| Symbol | |
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| ID | 5537522 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 79381 |
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| End bp | 79989 |
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| Gene Length | 609 bp |
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| Protein Length | 202 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640892229 |
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| Product | peptidoglycan-binding LysM |
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| Protein accession | YP_001430219 |
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| Protein GI | 156740090 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1388] FOG: LysM repeat |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0180593 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.117773 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCGCAGT GGATGCTGCT TACCCTCCTT CTGACTGCAC TCCTGTTGCC GCTGGTGGGC
GCTATGGCGC TGCGCCTGAC GCGACAGCGT CTTGATGAGC GGGTGCGCCT CACGTTGGCG
GTCGTCATCT TTGGAGCGGC TTTTGGTACA GTCTTTGCCC TGGCGCGCAG CAATCCATCG
AACCTGCGCA TCGCCGGATT GACCGTGATG CAGCCACTTG CCGCGCCAAT GGTCGAGGCG
CCCATAGTGT CACCAACTGA TGTTCCACTG CCGGAGGAGA TTACCGCCAC ACCGGCAGTG
CAACCCGCAC CGGCAACAGC GACGCTCGAA CCAACCGCCG AACCCACGGC AACACCCGAA
CCCACGGTAG CACCATCCGC GACGCCCGAA CCAACCGCCG AACCTACGGC AGCACCATCC
GCAACGCCGG AGCCGACCGC CACTCCTGTC CCGCAGGCGG GTCGACGGTA TGTGGTGCAA
CCGGGTGATA CCCTGCGCGG CATAGCAGAA CGCAACGGTG TGACGGTCGA GGCGCTCCTG
CGCGCCAACA ATCTGACGCC TGCCGCTGCC GATAACCTAC GGGTCGGACA GGAGTTGATC
ATTCCATGA
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| Protein sequence | MSQWMLLTLL LTALLLPLVG AMALRLTRQR LDERVRLTLA VVIFGAAFGT VFALARSNPS
NLRIAGLTVM QPLAAPMVEA PIVSPTDVPL PEEITATPAV QPAPATATLE PTAEPTATPE
PTVAPSATPE PTAEPTAAPS ATPEPTATPV PQAGRRYVVQ PGDTLRGIAE RNGVTVEALL
RANNLTPAAA DNLRVGQELI IP
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