Gene Rcas_0053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0053 
Symbol 
ID5537511 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp67679 
End bp68164 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content59% 
IMG OID640892218 
Producthypothetical protein 
Protein accessionYP_001430209 
Protein GI156740080 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.275779 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAAGT TAATCATCGT CTGGGGTGCG ATGGCGGCAA TCGTGCTGTC CGCGTGCAGC 
CGAACTCCCT CAGTCGCGCA GCCGACCGCG CCGGCGACTC AGGAACCGAC AAGTACGATT
ACCGTTATCG AAATGCCTAC GGCTCCCGTC CTGTCACCGT ATCCGGCGCC GACGGATGGC
GCATACCCCG CGCCGGACCA GGTGACGCCC GAACCGACCA GTGAGATCAA CGAAGCGACG
ATGAAGGCGA TGAGCGATCT GGCGCGCCAG AAATTGGCGG AAGAATTGGA GATCTCGGTC
GATCAGATAC AGGTTGTCAT GGCTGATCCA ACATACTGGA GCGATGCCAG CCTCGGTTGT
CCCCAACCTG GTATGACCTA CCAGCAGGTC GTCACGCCAG GATATCGGAT TACCCTTGTT
GTCGGGAATG ACCTCTATGT CTATCATACC GATACGGTGC AGACGGTGGT GCGGTGTCAA
CAGTGA
 
Protein sequence
MRKLIIVWGA MAAIVLSACS RTPSVAQPTA PATQEPTSTI TVIEMPTAPV LSPYPAPTDG 
AYPAPDQVTP EPTSEINEAT MKAMSDLARQ KLAEELEISV DQIQVVMADP TYWSDASLGC
PQPGMTYQQV VTPGYRITLV VGNDLYVYHT DTVQTVVRCQ Q