Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xaut_3156 |
Symbol | |
ID | 5420892 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthobacter autotrophicus Py2 |
Kingdom | Bacteria |
Replicon accession | NC_009720 |
Strand | - |
Start bp | 3504095 |
End bp | 3505060 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 640882402 |
Product | lytic transglycosylase catalytic |
Protein accession | YP_001418043 |
Protein GI | 154247085 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0205593 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0158011 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACCGG CCGCATCGCC CCGTTTTAGG CGCGCCGGCC GGATCATCGC TGCTGCCGTG CTCGCCCTTC TCGGCGCCGG GCCGGCCTTC GGCCAGAGCA CGGGCGAAGC CGCCCCGGAG AAGCCGGCCG CAGCATCGCC CACCCCGCCC GATCCCACGC CCCGCGCGGG GGGCGAAACG GTGGACCAGG CCATCTGCCG CCTCATCGAC GCGGCGGCGG CCAAAGAGGG CCTGCCGGCC GCCTTTCTCA CCCGCCTCAT CTGGCGCGAA AGCTCGTTCC GGCCCCACGT GGTGAGCAAC AAGGGGGCGC AGGGCATCGC CCAGTTCATG CCCGGCACGG CGAAGGAGCG CGGGCTTCAA AATCCGTTCG ATCCGGAGGC GGCGATCCCG GCCTCAGCGG CGCTGCTCGC CGACCTCAAC CGCCGCTTCG GCAATCTGGG GCTGGCGGCG GCGGCCTACA ATGCCGGTCC CGGGCGCGTC TCCGGCTTCC TCAACGGCGG CGGACTGCCG GAAGAGACGC GCGCCTATGT GCGCATCATC ACCGGCCGCC CGGCGGAGGA CTGGGCGGCG CTGCGGCGGC AGGGTGCGGA CAAGGGAGCC GACAAGGCAA GCGAGGCCCC GGCGCTGCCG CAGGAGGCCT GCCTTGCCAC CGTCGCCGCC CTGCGCAAGG GCGCGCCGGC GCCGCTGGCG GGCGAGCCGG CCAACCCACT GTTCGCCCCC TGGGGGGTGC AGATCTCCGG CAATTACTCA CGCGACATCG CCCTCGCCTC ATTCCGCCGG GAGGCGACCC GGCATCCCGC CGAATTCGGC GACCTGACGC CGGTGATCGT GGCGACGCGG GTGGGCGGGC GCGGCCCGCG CACCTTCTAT CGCGTGCGCC TGCCGGCCCA GACCAAGGCC GAGGGCATGA AAATCTGCGA CCGCCTGCGC AAGGCCGGCG GCGCCTGCCT GGTGCTGCCG AACTGA
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Protein sequence | MAPAASPRFR RAGRIIAAAV LALLGAGPAF GQSTGEAAPE KPAAASPTPP DPTPRAGGET VDQAICRLID AAAAKEGLPA AFLTRLIWRE SSFRPHVVSN KGAQGIAQFM PGTAKERGLQ NPFDPEAAIP ASAALLADLN RRFGNLGLAA AAYNAGPGRV SGFLNGGGLP EETRAYVRII TGRPAEDWAA LRRQGADKGA DKASEAPALP QEACLATVAA LRKGAPAPLA GEPANPLFAP WGVQISGNYS RDIALASFRR EATRHPAEFG DLTPVIVATR VGGRGPRTFY RVRLPAQTKA EGMKICDRLR KAGGACLVLP N
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