| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_2887 |
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| Symbol | |
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| ID | 5421613 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | + |
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| Start bp | 3212089 |
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| End bp | 3213294 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640882141 |
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| Product | conjugation TrbI family protein |
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| Protein accession | YP_001417783 |
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| Protein GI | 154246825 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2948] Type IV secretory pathway, VirB10 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.174381 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTGAGC CTGGCCCCCG GAAAGAAGAA CAGGAGGCGC CGCTGACCGG GCCGGCCGAC
GACGCTGCCG CCCCAATGCG GCTTCGTGCG GAAGCGCCGC GCGTCACGCG CCTCTCGCGC
AAGGTGCTTG CCGGCATCGG CCTTCTGGCG AGCGTCGGGA TCGGCGGCGC GTTGATCTAT
GCGCTCCAAA CCCGCGAGGG GGGGACGCCC GCCGAGGAAC TCCACTCGAC CGACAATCGC
TCGACTGCCG ACGGCCTTTC CGGATTGCCG CGCGATTATA GCGGCGTTCC GCAGCTTGGC
CCGCCGCTCC CGGGCGACCT CGGGCGCCCC ATCCTGGGCG CGCAGAATCG TGGTCAGCCG
TTGCCAGCCC AAGCCAATCC TGGTCTTAGC GCCGAGGAGC AGCGCCGTTT GCAGGAGATC
GAGACTGCGC GCGTCAGCAG GCTTTTCACC GGGACGGAGA ACCGTCCAAT GGCGTCGACG
GGCCCCGCGG CTGCGACGAT CGCGCCACCG CCGGCGCCTG ACCTCGCCGG CCTCGGCCTC
GCGCCACCAC CTGCCACACC ATCAGCGCAA GATCGACAGC TTGCATTCCT CAATGCGGCC
GCCGATCGGC GCACGGTGGC ACAGGATCGC GTTGCGGCGC CGGCGTCCCC CTATATCCTT
CAGGCGGGCG CCGTGATCGC CGCCGCGCTC ATCACGGGCA TCCGCTCCGA TCTTCCGGGC
CAGATCACCG CGCAGGTGAC GGAGAACATC TACGACAGCC CGACAGGGCG CATCCTGCTG
GTGCCGCAAG GGACGCGGAT CATCGGCCAG TACGACAACA ATGTTCAGTT CGGCCAGAGC
CGTGTGCTCC TGGTCTGGAA TCGGCTGATC CTCCCGAACG GGCGCTCGAT CGTCCTCGAG
CGTCAGCCCG GCGCCGACGC TGAAGGCTAT GCGGGCCTTC AGGATGGCAT CGACTATCAT
TGGTGGGAAC TGGCAAAGGC GGCGGGACTA TCCACGCTGC TGAGCATTGG CGCCGAGCTC
GCCACCAACG ACGACGACCG CCTGATTCAG GCGATCCGCA ACGGCGGGCA AGACACCATC
AACGATGCGG GCCAACAGAT CGTCCGCCGC CAGCTCAACG TCGCGCCGAC GTTGACCATA
CGGCCGGGCT TTCCCGTTCG CGTTATCGTC ACGCGTGACC TGGTCCTCGA ACCCCACGGA
GGCTAA
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| Protein sequence | MSEPGPRKEE QEAPLTGPAD DAAAPMRLRA EAPRVTRLSR KVLAGIGLLA SVGIGGALIY
ALQTREGGTP AEELHSTDNR STADGLSGLP RDYSGVPQLG PPLPGDLGRP ILGAQNRGQP
LPAQANPGLS AEEQRRLQEI ETARVSRLFT GTENRPMAST GPAAATIAPP PAPDLAGLGL
APPPATPSAQ DRQLAFLNAA ADRRTVAQDR VAAPASPYIL QAGAVIAAAL ITGIRSDLPG
QITAQVTENI YDSPTGRILL VPQGTRIIGQ YDNNVQFGQS RVLLVWNRLI LPNGRSIVLE
RQPGADAEGY AGLQDGIDYH WWELAKAAGL STLLSIGAEL ATNDDDRLIQ AIRNGGQDTI
NDAGQQIVRR QLNVAPTLTI RPGFPVRVIV TRDLVLEPHG G
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