| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_2093 |
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| Symbol | |
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| ID | 5423494 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | - |
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| Start bp | 2353572 |
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| End bp | 2354663 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640881345 |
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| Product | succinyl-diaminopimelate desuccinylase |
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| Protein accession | YP_001416994 |
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| Protein GI | 154246036 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01246] succinyl-diaminopimelate desuccinylase, proteobacterial clade |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.872712 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.304299 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGCCGC ACGCGGACGA TGCGCTGGAG CTGGTGGCGA AAAGGCTGGA GGCCGCTGGG
TACCGCGTGG AGCGCCTGAC CTTCGAGACC GGCGGCGTGC CCATCCCCAA TCTCTACGCC
CGTATCGGCA CCGACGGCCC GAACCTGTGC TTCGCCGGGC ATGTGGACGT GGTACCCGAG
GGAGATGCCA CCCAATGGCA CCACGCCCCC TTCGCCGGCA CGGTTGAGGA CGGCGTGCTC
CATGGGCGTG GGGCGGTGGA CATGAAGGGG GCGGTGGCCG CCTTCCTCGC CGCCGCGCTC
GCCTTCGGCC GGCCGCAGCG CGGCAGCCTC TCCTTCCTCA TCACCGGCGA CGAGGAAGGC
CCGGCGCTGG ACGGCACCGT GAAGGTGGTG GAGTGGCTGA AGGCCAGGGG CGAGACCATC
GACCATTGCG TGCTGGGCGA GCCCACCAAC CCCGATGCCC TGGGCGATGC CTTCAAGGTC
GGCCGGCGCG GCAGCCTCTC CGGCATCCTC ACCGTGAAGG GCGTGCAGGG GCACGTGGCC
TATCCGCACC TTGCCGACAA TCCCATTCCG CGCCTCCTGA AGCTCATCGG CGACCTGACC
GCCGCCCCCC TCGACCACGG CTCGGATTTC TTCCCGCCCT CCAACCTGGA GGTGGTCTCG
GTGGACGTGG GCAATCCGGT ATTCAACCTG ATCCCCGCGC AGGCCACCGC CCGCTTCAAC
GTGCGCTTCA ACGACCTGTT CTCGCTGGAG AGCCTGAAGT CCGAGATCAT CCGCCGCCTC
GACGGCGCCG GCCTCACCTA CGACCTCGCA TTCCAGACCG GGGCGAGCCA GAGCTTCCTC
ACCGCCCCCG GCCCGTTCAC GGACCTCGTC GCCAGCGCGG TGGAAGAGGT GACCGGGCGC
CGGCCCGAGC CCTCCACCTC GGGCGGCACC TCGGATGCGC GCTTCATCAA GGACATCTGC
CCGGTGGTGG AATTCGGCCT CGTGGGCCGC ACCATGCACA AGGTGGACGA GGCGACGCCG
GTCAAGGACA TCGAGGCTCT CACCGCCATC TACGGCCGCA TCATCGCCCG CTATTTCTCA
ACCTTCGCGT GA
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| Protein sequence | MTPHADDALE LVAKRLEAAG YRVERLTFET GGVPIPNLYA RIGTDGPNLC FAGHVDVVPE
GDATQWHHAP FAGTVEDGVL HGRGAVDMKG AVAAFLAAAL AFGRPQRGSL SFLITGDEEG
PALDGTVKVV EWLKARGETI DHCVLGEPTN PDALGDAFKV GRRGSLSGIL TVKGVQGHVA
YPHLADNPIP RLLKLIGDLT AAPLDHGSDF FPPSNLEVVS VDVGNPVFNL IPAQATARFN
VRFNDLFSLE SLKSEIIRRL DGAGLTYDLA FQTGASQSFL TAPGPFTDLV ASAVEEVTGR
RPEPSTSGGT SDARFIKDIC PVVEFGLVGR TMHKVDEATP VKDIEALTAI YGRIIARYFS
TFA
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