| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_0354 |
|---|
| Symbol | |
|---|
| ID | 5422078 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | + |
|---|
| Start bp | 368620 |
|---|
| End bp | 369264 |
|---|
| Gene Length | 645 bp |
|---|
| Protein Length | 214 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640879600 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_001415269 |
|---|
| Protein GI | 154244311 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.774788 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCCGTCCG CGCCCCGTGC CCGCCGCAAG GAAGACGCCC GCGCCCGCAT CCTCGACGAG
GCACGGCGCA TCGTGCTGGA GCACGGCTTC GAGGCCCTCA CGATGCGCCG CATCGCCGAA
GCGGCAGGCT ATTCACCCGC CGCCCTCTAT CTCCATTTCG CGAATCGGGA TGCCATCGCC
CGCGAGCTCG GGGAGAGCGG CATGCGCAGC CTGCTTGTCG CCTTGACCCA GGCTGCCGCG
GATCCCGATC CGGTGGCGCG CCTCGGGGCG CTGGCTTTGG CCTATGTCGC TTTTGCTCGG
AGTGATCCGG AGACCTACCG CCTGATCTTC ATGGAACCCG GCTTCGCCGC CAGCGCCCTT
GGCGGCAAGG ACGAGGCGGG GGCTGCGGCA TTTCAACTTC TCGCCGGCAG CTTCGAGGAC
CTCCACAGGG CCGGCCGGCT CAGGCCGGGG CAGGATCCGG CCGCGCTCGC GCTCACCTTC
TGGATCCTGG TCCACGGGAC GGCGAGCCTG AAACTCACCT GCTCTGCCTT TCTTTCGCCA
TCGGAAGAGG ACCTTCTCGC CGCCGCCCTC GCCGCCCTTC TCAACGGGGT GCTGGAGCCG
GATCCGACCG GGCAGAACCC GCCTGGGCGG TCAATCCGTC GCTGA
|
|---|
| Protein sequence | MPSAPRARRK EDARARILDE ARRIVLEHGF EALTMRRIAE AAGYSPAALY LHFANRDAIA
RELGESGMRS LLVALTQAAA DPDPVARLGA LALAYVAFAR SDPETYRLIF MEPGFAASAL
GGKDEAGAAA FQLLAGSFED LHRAGRLRPG QDPAALALTF WILVHGTASL KLTCSAFLSP
SEEDLLAAAL AALLNGVLEP DPTGQNPPGR SIRR
|
|---|
| |