Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_3280 |
Symbol | |
ID | 5455217 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 3512324 |
End bp | 3513682 |
Gene Length | 1359 bp |
Protein Length | 452 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640878871 |
Product | peptidase M48 Ste24p |
Protein accession | YP_001414542 |
Protein GI | 154253718 |
COG category | [R] General function prediction only |
COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.227869 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 0.68858 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTCTGA AAGCCGTGCA GCGGAAAGTC GGCGCGACGA TGACAAGTCT CATTGTCGGC GCGAGCCTTG CCTTTACCGG CGCGGCCCCT GCTTCCGCGC AGCGCATCGC GCTCATCAGC GATGCCGAAA CCGAAAACAT GCTGCGGGAA TATACCGATC CGATCCTGCG GGCGGCGGGC CTCGAATCGA GCGCGGTGAA GCTTCACCTC GTGAACGACC AGTCGCTCAA CGCCTTCGTG GCTGCCGGGC AGCAGATGTT CTTCAATACC GGCCTCATCA CCACGGTCGA CACGCCTTCC GAACTCATCG GCGTCATCGC GCATGAAACC GGCCATATGG CGGGCGGCCA TCTCGTGAAG CGGCGCGAGG AAATGGAAGG CTTGAGCGTT CCGATGCTCG CTTCCATGAT CCTCGGCGTG GGCGCGATCG CGGCCGGCGC GGGCGATGCG GGCATGGCGG TCATCATGGG CAGCCAGCAT CTGGCGACGC GGAGCCTGCT CGCCTTCACG CGCGAACAGG AAGCCAGCGC CGACCAGGCG GGCGCGACCT ATCTGCAGCG GTCCGGCATG TCCGGCCGCG GCATGCTCGA CCTCTTTGCC ACCATGCGCG ACCAAGAGCT GCTGACGGAA AACCGGCAGG ACCCTTATGC GCGTTCTCAC CCGATGTCCG GCGCGCGGCT TTCGGCGCTT GAAGCGCGGG TGAAGGAATC ACCCTATTAC GACCGCCGCG ACTCGCCCGA GCGTCTCCAC CAGTTCAAGA TGGTGCAGGC GAAGCTGCAT GGCTTTCTCG ACGACCCGAA CGCGACCTTC AACCGCTATC CCGAGTCCGA CAACAGCACC TATGCGCGAT ATGCGCGCGG CGTCGCCTAT CATCGCACAG GCAGGCTGGA CAAGGCGATG AGCGAAATCG AGCCGCTGCT GGAGATGGAG CCGTCGAACC CCTATATCCG CGAGGTTCAA GGGCAGATCT ATTTCGAGAG CGGCAAGGTC GAGGAAGCGA TTTCTTCCTA CCGGCAGGCG CTGGCGCTGC TGCCGGACGA ACAGTTTCAT CTCGGCCTCG GACGGGCGCT GCTGGCGCGC GGCGACAAGG CCTCCTCGGA GGAAGCGGTC AAGCACCTGC AGGCGGCGAG CAGCAGCGGC AACCAGCCCT ACGCCTTCTA CCAGCTCTCC ATCGCTTATG GGCAGCTCGA CAATATCGGG ATGGCGCAAT TGGCGACGGC GCAGTATTAC GATGCGCTGG GTGCGGTGAA GGAAGCGAAG ATGCATGCGA CCCGGGCCCA GAAGCTCCTG ACCAACGGGA GCCCCGAATG GCTTCGCGCG CAGGACATTC TCGTGCAGCC CAATCCTCAA CGCGGTTGA
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Protein sequence | MLLKAVQRKV GATMTSLIVG ASLAFTGAAP ASAQRIALIS DAETENMLRE YTDPILRAAG LESSAVKLHL VNDQSLNAFV AAGQQMFFNT GLITTVDTPS ELIGVIAHET GHMAGGHLVK RREEMEGLSV PMLASMILGV GAIAAGAGDA GMAVIMGSQH LATRSLLAFT REQEASADQA GATYLQRSGM SGRGMLDLFA TMRDQELLTE NRQDPYARSH PMSGARLSAL EARVKESPYY DRRDSPERLH QFKMVQAKLH GFLDDPNATF NRYPESDNST YARYARGVAY HRTGRLDKAM SEIEPLLEME PSNPYIREVQ GQIYFESGKV EEAISSYRQA LALLPDEQFH LGLGRALLAR GDKASSEEAV KHLQAASSSG NQPYAFYQLS IAYGQLDNIG MAQLATAQYY DALGAVKEAK MHATRAQKLL TNGSPEWLRA QDILVQPNPQ RG
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