| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3143 |
|---|
| Symbol | |
|---|
| ID | 5454091 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | - |
|---|
| Start bp | 3356621 |
|---|
| End bp | 3357895 |
|---|
| Gene Length | 1275 bp |
|---|
| Protein Length | 424 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640878733 |
|---|
| Product | phosphopyruvate hydratase |
|---|
| Protein accession | YP_001414407 |
|---|
| Protein GI | 154253583 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0148] Enolase |
|---|
| TIGRFAM ID | [TIGR01060] phosphopyruvate hydratase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.702195 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 0.21693 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGCCA TCATCGACAT CATCGGGCGC GAAATTCTGG ACAGCCGGGG CAATCCCACG
GTGGAAGTGG ATGTATTGCT GGAAGACGGC TCGCTCGGCC GCGCCGCGGT TCCTTCCGGC
GCTTCGACCG GCGCACACGA AGCTGTAGAG CTGCGCGATG GCGGTTCCCG TTACAAGGGC
AAGGGCGTTC TGAACGCGAT CGCAGCGGTC AATGGCGACA TCTTCGATGC GATCGGCGGC
ATGGATGCTT CCGAGCAGAT TCAGATCGAT CGCACCATGA TCGCGCTGGA CGGCACGTCC
AATAAATCGA ACCTCGGCGC GAATGCCATT CTCGGCGTGT CTCTTGCGAT AGCGAAGGCG
CAGGCCGCCT CGCTCGGCCA GCCGCTTTTC CGTTATATCG GTGGTCCTGC CGCGCGCGTG
CTGCCGGTGC CGATGATGAA TATCGTGAAT GGCGGCGAGC ATGCCGACAA TCCGATCGAT
ATTCAGGAAT TCATGATCAT GCCTGTCGCG GCAGGTTCGC TTGCAGACGC GGTGCGAATG
GGTTCGGAAG TCTTTCATAC GCTGAAGGCG GAACTGAAAT CGGCCGGCCA TAACACCAAT
GTCGGCGACG AAGGCGGCTT CGCACCCAAT CTCGCTTCGA CCGAGGAAGC CATCGGCTTC
ATCATGAAGG CGATCGAGAA GGCCGGCTAC AAGCCTGGCG ACGACATCTA CCTCGCGCTC
GACGCTGCTT CGACGGAGTT CTTCAAGAAC GGCGTCTATA ATCTCCAAGG TGAGGGCAAG
AAGCTCGATG CCGGCGGCAT GGTCGACTAC TGGGCAGATC TCGTCGGCAA ATATCCAATC
ATCTCCATCG AAGACGGAAT GGCGGAAGAC GACTGGGAAG GCTGGAAGGC GCTGACGGAC
CGGATCGGTA GCAAGGTGCA GCTCGTGGGC GACGATCTCT TCGTGACCAA CAAGCGCCGC
CTCGCGGACG GAATCGCAAA GGGAACGGCG AATTCGATCC TGGTGAAGGT GAACCAGATC
GGCTCGCTGA CCGAGACGCT CGAATCCGTC GAGATGGCTC ACAAGGCAAG CTACACCGCC
GTCATGTCGC ATCGTTCCGG CGAGACGGAA GACGCAACAA TTGCCGATCT CGCGGTGGCG
ACGAATTGCG GACAGATCAA GACAGGATCG CTCGCGCGCT CCGACCGGCT GGCGAAATAC
AACCAGCTCA TCCGCATCGA GGAGGCGTTG GGGCCGTCGG GAGAATACGC GGGCAAGTCG
GTCCTGAAGG GCTGA
|
|---|
| Protein sequence | MAAIIDIIGR EILDSRGNPT VEVDVLLEDG SLGRAAVPSG ASTGAHEAVE LRDGGSRYKG
KGVLNAIAAV NGDIFDAIGG MDASEQIQID RTMIALDGTS NKSNLGANAI LGVSLAIAKA
QAASLGQPLF RYIGGPAARV LPVPMMNIVN GGEHADNPID IQEFMIMPVA AGSLADAVRM
GSEVFHTLKA ELKSAGHNTN VGDEGGFAPN LASTEEAIGF IMKAIEKAGY KPGDDIYLAL
DAASTEFFKN GVYNLQGEGK KLDAGGMVDY WADLVGKYPI ISIEDGMAED DWEGWKALTD
RIGSKVQLVG DDLFVTNKRR LADGIAKGTA NSILVKVNQI GSLTETLESV EMAHKASYTA
VMSHRSGETE DATIADLAVA TNCGQIKTGS LARSDRLAKY NQLIRIEEAL GPSGEYAGKS
VLKG
|
|---|
| |