| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3037 |
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| Symbol | |
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| ID | 5456002 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 3237796 |
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| End bp | 3238746 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640878625 |
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| Product | protein-export membrane protein SecF |
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| Protein accession | YP_001414301 |
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| Protein GI | 154253477 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 69 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGACATC TGAAACTCAT TCCGGACGAC ACGAATTTCC AGTTCGTCAA ATGGCGCTAT
ATCGCCGTCG GCCTCTCGCT TCTAGTGATG GTTGTTTCAA GCGCGCTTCT GATTACACGC
GGACTGAACT TCGGTATCGA TTTCGAGGGT GGCATTGTCA TCGAGATTTC GACTGACGGT
CCGGCCGATA TTTCTCAGCT TCGTGCCGAT ATTGGTGGTC TCGATCTCGG TGAAGTCCAG
ATTCAGGAAT TCGGCCAGGC CGACGACGTG TTGATCCGCG TCCAGTCGCC CAGGGACGGC
GGAGAAGAAG CTTCGCAGGA AGTCGTCAAC AAAATCAGAG GCCAGCTCGG TGACACGGTC
GAATACCGGC GCGTCGAGGT TGTGGGTCCG CAGGTGAGTG GTGAGCTTGT CCAGGACGGG
ATTCTCGCTG TCGTCATCTC CATTGCGTTG ATGCTGGTTT ATATCTGGTT CCGCTTCGAG
TGGCAGTTCA GCCTGGGTTC GGTCATAGCC CTCGTTCATG ACGTCATGGC AACACTTGGA
CTGTTCTGTA TCCTGCAGCT CGAGTTCAAC CTGACCTCGA TCGCGGCCAT CCTCACCATT
GTCGGTTATT CGATGAACGA TACGGTTATC GTCTTCGACC GCGTGCGCGA GAACCTGCGA
AAATACAAGA AGATGGATCT CGGTGCCTTG ATCGATCTTT CGATAAACCA GACCTTGTCG
CGCACCGTCA TGACCTCGGG TACTACGCTT CTCGCGCTTC TGGCACTTTT CATTTTTGGC
GGGGAAGTGC TGCGCGATTT CACCTTCGCG ATGATCTTCG GCATTTTCAT CGGCACCTAT
TCGTCTATCT TCATCGCGGC GCCGGTTCTG CTTACCGTCG GCGTCACGCG CGATGCATCG
ACCGGCGGTC TGGGCCGCGC CGCCAAGGAC AAGGCGCCCG AAAAGGCGTG A
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| Protein sequence | MRHLKLIPDD TNFQFVKWRY IAVGLSLLVM VVSSALLITR GLNFGIDFEG GIVIEISTDG
PADISQLRAD IGGLDLGEVQ IQEFGQADDV LIRVQSPRDG GEEASQEVVN KIRGQLGDTV
EYRRVEVVGP QVSGELVQDG ILAVVISIAL MLVYIWFRFE WQFSLGSVIA LVHDVMATLG
LFCILQLEFN LTSIAAILTI VGYSMNDTVI VFDRVRENLR KYKKMDLGAL IDLSINQTLS
RTVMTSGTTL LALLALFIFG GEVLRDFTFA MIFGIFIGTY SSIFIAAPVL LTVGVTRDAS
TGGLGRAAKD KAPEKA
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