Gene Plav_2937 details

Gene Information

• Locus tag: Plav_2937
• Symbol: rplM
• ID: 5455926
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Parvibaculum lavamentivorans DS-1
• Kingdom: Bacteria
• Replicon accession: NC_009719
• Strand: +
• Start bp: 3135530
• End bp: 3136093
• Gene Length: 564 bp
• Protein Length: 187 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 640878520
• Product: 50S ribosomal protein L13
• Protein accession: YP_001414201
• Protein GI: 154253377
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0102] Ribosomal protein L13
• TIGRFAM ID: [TIGR01066] ribosomal protein L13, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 35
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 33
• Fosmid unclonability p-value: 0.000493547
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGACGTTGA CAGGGGCCCA AGGCTCGCCT AAAAGCAGCG CCGAACCGGG GGCCCGAGCG 
TGGCCCCTCT CTATTTGCAG TTTCGCCAGG ATTTTTCGCA TGAAGACCTA TTCCGCGAAA 
GCCGCCGAAA TCGAGAAGAA GTGGATCGTG ATCGATGCCG AAGGCATCGT GGTCGGCCGT 
CTCGCGTCCT ATGTCGCCAA TATCCTGCGC GGCAAGCACA AGACGACCTA TACGCCCCAT 
CTCGATTGCG GCGACAACGT CATCATCGTG AACGCCGCCA AGGTGCAGTT CACGGGCGCG 
AAGTACGATG ACAAGCGCTA CTACCGCCAC ACGGGCCACC CGGGCGGCAT CAAGGAAACG 
AGCCCGAAGC GCATTCTCGA AGGCCGTTTC CCCGAGCGCG TGCTCGAACT CGCCGTGAAG 
CGCATGATCC CGCGCGGACC GCTTGGCCGC AAGCAGATGG GCAATCTGCA CATCTATGGC 
GGCGCCGAGC ATCCGCATGA GGCGCAGCAG CCGAAGAAGA TCGACTTCGC CGCCTTGAAC 
CGCAAGAACG TCAGGATCGC ATAG 

 

Protein sequence

MTLTGAQGSP KSSAEPGARA WPLSICSFAR IFRMKTYSAK AAEIEKKWIV IDAEGIVVGR 
LASYVANILR GKHKTTYTPH LDCGDNVIIV NAAKVQFTGA KYDDKRYYRH TGHPGGIKET 
SPKRILEGRF PERVLELAVK RMIPRGPLGR KQMGNLHIYG GAEHPHEAQQ PKKIDFAALN 
RKNVRIA