Gene Plav_2683 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2683 
Symbol 
ID5454604 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2884203 
End bp2884667 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content60% 
IMG OID640878260 
Productdehydratase 
Protein accessionYP_001413948 
Protein GI154253124 
COG category[I] Lipid transport and metabolism 
COG ID[COG2030] Acyl dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGGAC TTTATTTCGA GGAATTCAGC GAGGGTCAGA TATTCAAGCA CCCGATCAGG 
CGCACGGTCA CCGAGACGGA CAACGTCCTC TTCTCGACCA TGACCATGAA CCCCGCCGCC
CTCCACCTCG ACCATCACTA CGCGGCAACC GAAACCGAAT TCGGCAAGCC GCTGGTGAAC
AGCCTCTTCA CCCTCGGCCT GATGATCGGC ATCTCGGTCA ACGACACGAC GCTTGGCACC
ACTATCGCCA ATCTCGGCAT GAACGACGTC GTCTTTCCGA AGCCCGTCTT CCAGGGCGAT
ACGCTGCGGA TCGAAACGAA GGTGCTTTCG AAGCGCCGCT CGAAGTCCCG CCCTCTCGCC
GGCATCGTCA CCTTCGAACA CAAGGCCTAC AACCAGCACG GAGACGAAGT TGCCTCCTGC
ACGCGCCAGG CTTTCATGCA CGCCAAAAGC GTCGAAGAGG CCTGA
 
Protein sequence
MPGLYFEEFS EGQIFKHPIR RTVTETDNVL FSTMTMNPAA LHLDHHYAAT ETEFGKPLVN 
SLFTLGLMIG ISVNDTTLGT TIANLGMNDV VFPKPVFQGD TLRIETKVLS KRRSKSRPLA
GIVTFEHKAY NQHGDEVASC TRQAFMHAKS VEEA