| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2449 |
|---|
| Symbol | |
|---|
| ID | 5455411 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | + |
|---|
| Start bp | 2652665 |
|---|
| End bp | 2653174 |
|---|
| Gene Length | 510 bp |
|---|
| Protein Length | 169 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640878025 |
|---|
| Product | dihydrofolate reductase |
|---|
| Protein accession | YP_001413715 |
|---|
| Protein GI | 154252891 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0262] Dihydrofolate reductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 0.110989 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATGTTT CCTATGTCGT CGCCATCGCG GATAACGGCG TCATCGGCCG CGACAATTCA
CTGCCGTGGC GGCTGTCGGG CGACATGGCT TTCTTCAAGC GCATCACCAT GGGCAAACCG
GTCATCATGG GCCGCAAGAC ATGGGAATCG CTTCCGCGAA AGCCCTTGCC GGGCCGGCCC
AACATCGTCG TCACGCGAGA CGCGCAATAC GAGGCGGAAG GCGCCGAAAT CGCCGCCTCG
GCGGTTGAGG CACTGAGGCG CGGCCGCGAA CTCGCCTCGG CGAGCGGCGC GGACGAGGTC
ATGGTGATCG GTGGGGCGCA GCTTTACGCC GAAATGTTCG ACGATGCGAC GCGTCTCTAT
ATCACGGAGG TCCACGCGGC CCCGGAAGGC GATGTCAGTT TCCCGGCCTT CGACGCGGCG
CATTGGCGCG AAGTGTCGCG CGAGCGGCAC AAGGCGGGCG AGAAGGACAG TGCGGATTAT
TCCTTCGTCG TTCTGGAACG GCACGGCTGA
|
|---|
| Protein sequence | MHVSYVVAIA DNGVIGRDNS LPWRLSGDMA FFKRITMGKP VIMGRKTWES LPRKPLPGRP
NIVVTRDAQY EAEGAEIAAS AVEALRRGRE LASASGADEV MVIGGAQLYA EMFDDATRLY
ITEVHAAPEG DVSFPAFDAA HWREVSRERH KAGEKDSADY SFVVLERHG
|
|---|
| |