Gene Plav_2385 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2385 
Symbol 
ID5456632 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2575305 
End bp2575700 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content64% 
IMG OID640877961 
ProductDoxX family protein 
Protein accessionYP_001413652 
Protein GI154252828 
COG category[S] Function unknown 
COG ID[COG2259] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.0905931 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value0.641291 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAACG CCGATATTCA CCTCCTGATC GCGCGCCTCT GCCTCGCCGC CATATTCATC 
TATAGCGGCG TGACGAAACT GGTCGGCTGG GAAGGCGCGC TTGCCGAATT TTCCGGGCTC
GGATTGCCGT TTCCCGCCTT GGCGGTGCTC GCGACCATCG CGGTGCAGCT TGCGGGCGGC
CTCGCGGTCG CCAGCGGTTA TGGCGCGCGT ACGGCTGCGC TCGTCCTTGC CGGTTTCACC
ATTGTGGCCA CGATGATCGG TCATCCCTTC TGGCGGTTCG AGGGTGAGGA TTTTCATCGC
CAGCTCACGG TTGCGCTCGA GCATCTGGCC ATTGTCGGCG GCTTTCTTCT TCTCGCGGCG
CGGGGGCCAG GCGCCCTGTC CCTCGGCCGT TCTTGA
 
Protein sequence
MKNADIHLLI ARLCLAAIFI YSGVTKLVGW EGALAEFSGL GLPFPALAVL ATIAVQLAGG 
LAVASGYGAR TAALVLAGFT IVATMIGHPF WRFEGEDFHR QLTVALEHLA IVGGFLLLAA
RGPGALSLGR S