| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1910 |
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| Symbol | |
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| ID | 5454969 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2078119 |
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| End bp | 2079681 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640877487 |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | YP_001413182 |
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| Protein GI | 154252358 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGCTTCG ATGATGGCGA GCGGCCGGGT GCCGGAAAGG AAACCGGCGG CGCCGAGCCC
GCCCGGCACA AGCCGGGCAC CCTTGTGCAG AAATCATTGA CGGGTGCCTT CTGGACCTTC
GGCGGCTCCG TCGTCCAGGC GGTCATGAAG ATGCTGGTCC TCGCCGTTCT GGCGCGCCTG
CTGACACCGC ATGATTTCGG CGTGGTCGGC GCGGCGATGG TCGTGGTCGG CCTGCTCAAC
ATATTCACGC AGCTCGGCGT CGGCCCGGCC ATTGTCCAGC GGGTGGATTT GACCGACACG
CATATAAAGA CCGGCCAGAC GCTCTCTCTC GCCATGGGTT TCATCACCGG CGCCATCTTC
TATTTCTCGG CGCCCGCCAT CGAAGGCTTC TTCCGCATCG ACGGGGTTGC CGATGTGGTC
CGCGTGCTGG CTTTCGTTTT TCCGCTGAAG GGCATGGCGA TCGTCGCAGA GGGCCTTCTC
CAGCGCAACA TGCGCTTCCG CGACATGGCC GCCGTTGAAT CCGCCAGCTA TATTTTCGGC
TATGCGCCGG CGGCCATCGT GCTTGCCGCG CTCGGCTGGG GGGCGGAGGC GCTTGCCATC
GGCCTTCTGG CGCAGGCATT CCTGCTGCGC GTCGCCTATC GCTTTCTGGT CCGGCAGAAA
TTTTCGCTGG CGCTGGATAG CGGCGCGATG AAGCAATTGC TGAATTATGG CGGCGGCCAC
ACGCTGGCGC GGCTCGGCAA TTTCTCCGCC CTCAATGCGG ATAATCTGGT CGTCGGCCGC
TGGCTGGGGG CAGAGGCGCT CGGCATCTAT GCGCGCTCCT ATCAACTTAT CATGCAGCCT
GCCAATCTTT TCGGCACCGT GGTCGACAAG GTGCTCTTCC CGGCCATGGC GAGCGTGCAG
GATGACAAGG AGCGCCTCGC CCGCGCCTAT GAGCGGCTTA CCGGCGTCGT GGCGATGATA
ACCCTGCCAT TGAGCTTTGT GCTGATCGTC CTCGCGGATG AACTGATCCT CACGGTTCTC
GGCGGGCAGT GGGGCGGCGT CGTCCTGCCG TTCCAGATTC TGGTTGTCAC GCTGGTTTTC
CGCACGGCCT ACAAATTGGG GGACTCCTTG TGGCGTGCGG TAGGGGCGAC TTATCGCGGA
GCGGCTCGTC AGTGGACATA TGCTGCCGCA GTGCTAGCCG GGGCGGCGTT TGGGCAGTTT
TGGGGCATAT CCGGCGTGGC CACTGGTGTA GGAATTGCAA TTGCGGTGAA CTTCTGGCTT
ACGCTGCTGA TGTGTCGCAA GCTGATTAAT ATATCGCTCA AGAAGATCGG TGGGGCCTTG
TTGCGTCATT TCGCCATCGC CCTTGCGGTG GGGGGTATAG CGCTGGCAGG CAAGCTTGCA
ATGTTGGAGT TTGGAGTTTC GGGGCCCGTC ATACTGGTTG TAACCGGAGC CCTTTTGGCG
GTATGCGCAA TGTTGGCGTA TCGTTTTTTA ATAAGCATCT TCGGTGCCGA GGGCGAGTGG
CTCAGAGATG TTGTTGTCGA AAAAATAAGT AAGAGAAAAC GCTCCAGGAC ATTTGGGCGG
TAG
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| Protein sequence | MSFDDGERPG AGKETGGAEP ARHKPGTLVQ KSLTGAFWTF GGSVVQAVMK MLVLAVLARL
LTPHDFGVVG AAMVVVGLLN IFTQLGVGPA IVQRVDLTDT HIKTGQTLSL AMGFITGAIF
YFSAPAIEGF FRIDGVADVV RVLAFVFPLK GMAIVAEGLL QRNMRFRDMA AVESASYIFG
YAPAAIVLAA LGWGAEALAI GLLAQAFLLR VAYRFLVRQK FSLALDSGAM KQLLNYGGGH
TLARLGNFSA LNADNLVVGR WLGAEALGIY ARSYQLIMQP ANLFGTVVDK VLFPAMASVQ
DDKERLARAY ERLTGVVAMI TLPLSFVLIV LADELILTVL GGQWGGVVLP FQILVVTLVF
RTAYKLGDSL WRAVGATYRG AARQWTYAAA VLAGAAFGQF WGISGVATGV GIAIAVNFWL
TLLMCRKLIN ISLKKIGGAL LRHFAIALAV GGIALAGKLA MLEFGVSGPV ILVVTGALLA
VCAMLAYRFL ISIFGAEGEW LRDVVVEKIS KRKRSRTFGR
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