| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1288 |
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| Symbol | |
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| ID | 5453955 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1420508 |
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| End bp | 1422418 |
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| Gene Length | 1911 bp |
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| Protein Length | 636 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640876858 |
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| Product | sulfotransferase |
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| Protein accession | YP_001412565 |
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| Protein GI | 154251741 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.494721 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAAGA ACTCTCCTCC CAAAGGGCCT GGCACTCCCG GTTTCCGGCC CTCCGCAGCG
TTCAAGCCCA CGGTAGGGCT GCCAGCCTCG GCCAGTGCTG CCCGGCCTAC GGTCGGCCTG
CCGGGTTCGG CGGGGGGCGG CTTTCGCCCC GGATCAGCTC CGGTGCAGCC GCGTGTGACG
CAAGAGGATA TTCTCCGAGC TCTTCAACTT GGCGGCTCCC ATCTCGCGGC GGGGCGCGTG
GAGCATGCCG GCGCGGCCGC CGTGGCTATC CTCAAGGCGG AACCGAAAAA TCCCGATGCG
CTTCATCTGC TCGGTCTCGT GGCGTTGGCG AAGGGCGATG CGGAGAATGC GGAGAAGCTC
ATTGCATCGG CGGCAGCACT CATGCCGCGC CATGTGAATG TCTGGGTCAA TCTCGGGAAT
GCGCAGCGGG ATCAGGGAAA GGTCGAGGAG GCGCTCATCT CCTATCGCAG GGCGGAGGCT
CTCAATCCCG CTTATGCGGA TATTTTTCTC AACAGAGGCC AGCTCTATCA AGAAACCTCG
CAATATGCGG AAGCCATTGC CGATTTCGAA AGGCTGATGG AAGTTTCGCC GGATGAGCCG
GGGCCCTATA TGCGGGCTGC CTCTGCGGCG ACGGATGCGG GACGGTTTCG CGATGTCCTC
ACATATTGCC AACGCGCGCT CGACAAGCTC GATGAAGTGC CTGCGCAGCT CAAGGCGATC
ATTGCGACGA CGCATGAGCG TATCGGCGAG TTGGATAAGG CTGTCGAATG GTCCGAGCTT
GCGCTGACCG ATAATCCCAA GAATGGTGCG GCTCTTCGTA CATGGTCGAA AGCGCGGCGC
CGGCAACGCA AGAATGATGC GGAGCTTCTG ACGGAATTGC GGCGGCGTCT TGAGGAAATA
GATTTCTCCA ATGCGTCGGC TTCGGAGGCA CGACTGATTT ACTCCGAACT TGCGCAGCTC
TGCGATGAAC AAAGCGACGT GGAAAGCGCC TTTGGCTATT TCACGAAAAT GAATAGCCGC
ACGAAAGAGC TTCCGGAACT CAAACGAGTC GATCAGCGGA AATTCATCGA CGAGGTGAAC
CTGCTGAACG ATCTTTTCAG CGGGCAGTTC GTCGAAAGCT GGACGGCTTT GCCCGAGATA
GGCCTGGAGC CCGGACATGC CGCAGTGCCG GTATTCCTCG TGGGGTTCCC GCGCTCCGGC
ACCACGCTGC TGGATCAAAT CCTCGACGCT CATCCCGCCG TCCAGGTTTT CGAAGAGCTG
CCTTTTCTAG GCAAGGTAAA AAAATCGATC GCAGGCTATC CCCACTCTCT TGCCGGAATG
TCGGAGACGG AAAGAGCAAA TGCCAGGAAG GTTTACTGGG ATGCGCTCCG CAAGGAAGGC
GCAGACCTTG AAGGGAAGAT GATCGTCGAC AAGATGCCGC TCGATCTGGT GCATAGCGGC
TTGATAGCAC GGGTTTTCCC CGAGGCGAAA ATCATCTTCG CGCTCCGGCA TCCTGCTGAT
TGTGTGCTTT CCTGCTTCAT GCAGGACTTT GTTCCGAATG CGTCGATGTT GAATTTTCTG
ACGCTTGATG GCTCCGCGGC GCTTTATGAC AGCGTCATGA ATCTGTGGGA AACATACCGG
AAGACGCTTT CGCTCAATGT GCATGAAGTG CGCTATGAAA ACCTCGTTGC CGACCTGCGC
GGCGAAGTTG AGCCGGCGCT GAACTTTCTC GATCTTCCGT GGGACAGCGC CGTCAATGAT
CCGGCAGCGC ATGCGCTCGC CCGCGGTACC ATCAGGACGC CGTCATATTC GCAAGTGACG
CAGCCGATCT ATTCGAGTTC CACCGAGCGC TGGCGGCGTT ACGAGGCGCA GATGCGGCCG
GTCCTTCCCG TTCTCCAACC GCATGTCGAG CGGTTCGGCT ATTCGCTTTG A
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| Protein sequence | MTKNSPPKGP GTPGFRPSAA FKPTVGLPAS ASAARPTVGL PGSAGGGFRP GSAPVQPRVT
QEDILRALQL GGSHLAAGRV EHAGAAAVAI LKAEPKNPDA LHLLGLVALA KGDAENAEKL
IASAAALMPR HVNVWVNLGN AQRDQGKVEE ALISYRRAEA LNPAYADIFL NRGQLYQETS
QYAEAIADFE RLMEVSPDEP GPYMRAASAA TDAGRFRDVL TYCQRALDKL DEVPAQLKAI
IATTHERIGE LDKAVEWSEL ALTDNPKNGA ALRTWSKARR RQRKNDAELL TELRRRLEEI
DFSNASASEA RLIYSELAQL CDEQSDVESA FGYFTKMNSR TKELPELKRV DQRKFIDEVN
LLNDLFSGQF VESWTALPEI GLEPGHAAVP VFLVGFPRSG TTLLDQILDA HPAVQVFEEL
PFLGKVKKSI AGYPHSLAGM SETERANARK VYWDALRKEG ADLEGKMIVD KMPLDLVHSG
LIARVFPEAK IIFALRHPAD CVLSCFMQDF VPNASMLNFL TLDGSAALYD SVMNLWETYR
KTLSLNVHEV RYENLVADLR GEVEPALNFL DLPWDSAVND PAAHALARGT IRTPSYSQVT
QPIYSSSTER WRRYEAQMRP VLPVLQPHVE RFGYSL
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