| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0976 |
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| Symbol | |
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| ID | 5457038 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1054191 |
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| End bp | 1054823 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640876547 |
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| Product | OmpW family protein |
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| Protein accession | YP_001412256 |
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| Protein GI | 154251432 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3047] Outer membrane protein W |
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| TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 0.591363 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGAACT ACAGGGCAGG GGTGGCGGCA ATTGCGCTGG TGGCGGGCTT CTCGGTCACA
CCGGCACACG CCGAATTCAC AGGCAAGTCG GCGGGCGATT TCATGGTCCG CGCCCGCGCC
ATCGCGGTCA TACCCGATGA GGACGCATCG ACGACCATCG GCGGAAACGT GAGCATCGAC
AACGACGTAG TCCCGGAAGT CGACTTCACC TACTTCGTCA CCGACAGCAT CGCGCTCGAG
CTCATCGCGG CGACGACCAA GCATGACGTG TCCCACAATG CGGGTATCGA TCTCGGCGAA
GTAAGCCTTC TGCCGCCGAC ACTTACGCTG CAGTACCACT TCATGCCGAA GGAGCGTTTC
AGCCCCTATG TAGGCGCGGG CCTCAACTAC ACGATCTTCT ACAACGAGGA CGTCGCAGCC
GGCAGTCCGG TCACGAGCAT CGATTACGAC AATGCTTTCG GCTATGCGCT ACAGGTTGGT
GCCGACTACG CGCTCAACGA CAACTGGTAT GCGAACGTCG ACGTGAAGAA GCTTTTCCTC
AGCACCGACG TGTCGATGAA TGGCGGCGCC ATCACGGCCG ATGTCGACAT CGATCCCTGG
ATCGTCGGCG TCGGTGTCGG CTACCGCTTC TAG
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| Protein sequence | MKNYRAGVAA IALVAGFSVT PAHAEFTGKS AGDFMVRARA IAVIPDEDAS TTIGGNVSID
NDVVPEVDFT YFVTDSIALE LIAATTKHDV SHNAGIDLGE VSLLPPTLTL QYHFMPKERF
SPYVGAGLNY TIFYNEDVAA GSPVTSIDYD NAFGYALQVG ADYALNDNWY ANVDVKKLFL
STDVSMNGGA ITADVDIDPW IVGVGVGYRF
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