| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0264 |
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| Symbol | |
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| ID | 5453683 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 285462 |
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| End bp | 286292 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640875828 |
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| Product | glutamate racemase |
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| Protein accession | YP_001411544 |
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| Protein GI | 154250720 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0796] Glutamate racemase |
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| TIGRFAM ID | [TIGR00067] glutamate racemase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.741636 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACA AGAGCGAACG CGCCATCGGC GTTTTCGATA GCGGCATCGG CGGCATCACC
GTCCTGAAGG CCCTGCGCGC GGCGCTGCCG CATGAAGACC TCGTCTATCT GGGCGATACG
GCGCGCCTGC CCTACGGCAC GAAGAGCCCC GAAACCGTGA CGGCCTATGC AACGCAGGCG
ACGAAGCACC TCATGGAGCA TGGGGTGAAG ATGGTCGTCA TCGCCTGCAA TACGGCGTCC
GCCGTCGCGA TCGGGCCGCT GACGGAAGCC TTGAAGCCCT TGCCCGTCAT CGGCGTCATC
GAGCCGGGGG CGAAAGCAGG CGTCGCGGCG ACAAAAAGCG GACGCATCGG CGTCATCGGA
ACCGAAGCGA CCGTGCGGGG CGGCGCTTAC ATGCGCGCGA TCCATGCGCT CGATCCGAAA
GCGCAGGTAA CGCAGGCGCC CTGCGGCCTC TTCGTAACGC TCGCAGAAGA AGGCTGGACC
TCCGGCGAGG TGGCCGAGGC GGCAGCGAAA CGTTACCTCG CGCCGCTCTT CAAGGGCCGC
AATGCGCCGG ACACGCTGGT TCTCGGTTGC ACGCATTTTC CCGTGCTCGC GCGCATCATC
AAGAAAGTGG TGGGCAAGAA CGTCAAGCTC GTCGACAGCG CGGCGACGAC CGCCAAGGCC
GTTGAGGCGG CGCTTGCCGA ACAGGGGCTG GCGTCCCGGC GGCGCGGCAA GGGGAAGACA
CGCTTCCTCG CCACCGACAG CGCCGAACGC TTCGCCCGCG TGGGCGGCAT ATTCTTCGGC
GAGACGATCC GCCCAAAGGA TGTGGAACTG GTGGATATAA GGCCGAGCTG A
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| Protein sequence | MSDKSERAIG VFDSGIGGIT VLKALRAALP HEDLVYLGDT ARLPYGTKSP ETVTAYATQA
TKHLMEHGVK MVVIACNTAS AVAIGPLTEA LKPLPVIGVI EPGAKAGVAA TKSGRIGVIG
TEATVRGGAY MRAIHALDPK AQVTQAPCGL FVTLAEEGWT SGEVAEAAAK RYLAPLFKGR
NAPDTLVLGC THFPVLARII KKVVGKNVKL VDSAATTAKA VEAALAEQGL ASRRRGKGKT
RFLATDSAER FARVGGIFFG ETIRPKDVEL VDIRPS
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