Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_0195 |
Symbol | |
ID | 5456161 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 220006 |
End bp | 220725 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640875756 |
Product | hypothetical protein |
Protein accession | YP_001411475 |
Protein GI | 154250651 |
COG category | [S] Function unknown |
COG ID | [COG5375] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.296411 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 0.846633 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGAGG GTTCCGGCGA CGATCCGTCC GGCGGCGATC CGGCCACGGG GCGGAGACGG CCCGCCCCGC GCAGCGCCGC GCCCGTGCCG CCGCGCCCCG TCCAGGACCG CCCCGTCAAC AGCCGCTACA GCAGCTTCGT TTCCTTGATG AAGGTGGGCC TGCCCGTCGG CGCCATTGTG CTGCTTGGCG TGGTGCTGGT CTATTCCGGC GTCTTCGACA GCGACGACAG GCTTGAAGTC ACCTTCCGCG AAATCGACAC GCAGCCGAGC GATCTGCGCA TGGTGAGCCC GCGTCTCGAC GGCGTCACCA GCGACGGCAA GCCCTATGTC ATCACCGCCG ACAATGCGAC GCAGGACCCG GCCAGCCCGA ATTTCGTCAC GCTGGACAAC ATCCAGGCCG ATATCAAGTT CAACGAGGAA GAAGACTGGC TGTCGCTGAC GGCGACGAGC GGGCGCTACG ACTCCGAGGC GCAAACGCTC AATCTCTCGC GGCAGATCGA TATCTTCACC ACCTGGGGCT ATGAGGTGCA TGGCGAAGAG GCGACGGTGG ATTTCGACCA GGGCATGCTG ACGAGCGAAA AGGAAGTCAC GGGCCAGGGA CCGCTTGGAA CGCTGCGCGC CGACCGCATG CGCGCCCATA ACGCGACGCA GGTTCTGCGT TTCGACGGCA ATGTAAAAAT GCTGATCCTG CCGGATCAGC CGAGCGAGGG GGACGAATGA
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Protein sequence | MSEGSGDDPS GGDPATGRRR PAPRSAAPVP PRPVQDRPVN SRYSSFVSLM KVGLPVGAIV LLGVVLVYSG VFDSDDRLEV TFREIDTQPS DLRMVSPRLD GVTSDGKPYV ITADNATQDP ASPNFVTLDN IQADIKFNEE EDWLSLTATS GRYDSEAQTL NLSRQIDIFT TWGYEVHGEE ATVDFDQGML TSEKEVTGQG PLGTLRADRM RAHNATQVLR FDGNVKMLIL PDQPSEGDE
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