Gene Plav_0195 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_0195 
Symbol 
ID5456161 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp220006 
End bp220725 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content65% 
IMG OID640875756 
Producthypothetical protein 
Protein accessionYP_001411475 
Protein GI154250651 
COG category[S] Function unknown 
COG ID[COG5375] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.296411 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value0.846633 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGG GTTCCGGCGA CGATCCGTCC GGCGGCGATC CGGCCACGGG GCGGAGACGG 
CCCGCCCCGC GCAGCGCCGC GCCCGTGCCG CCGCGCCCCG TCCAGGACCG CCCCGTCAAC
AGCCGCTACA GCAGCTTCGT TTCCTTGATG AAGGTGGGCC TGCCCGTCGG CGCCATTGTG
CTGCTTGGCG TGGTGCTGGT CTATTCCGGC GTCTTCGACA GCGACGACAG GCTTGAAGTC
ACCTTCCGCG AAATCGACAC GCAGCCGAGC GATCTGCGCA TGGTGAGCCC GCGTCTCGAC
GGCGTCACCA GCGACGGCAA GCCCTATGTC ATCACCGCCG ACAATGCGAC GCAGGACCCG
GCCAGCCCGA ATTTCGTCAC GCTGGACAAC ATCCAGGCCG ATATCAAGTT CAACGAGGAA
GAAGACTGGC TGTCGCTGAC GGCGACGAGC GGGCGCTACG ACTCCGAGGC GCAAACGCTC
AATCTCTCGC GGCAGATCGA TATCTTCACC ACCTGGGGCT ATGAGGTGCA TGGCGAAGAG
GCGACGGTGG ATTTCGACCA GGGCATGCTG ACGAGCGAAA AGGAAGTCAC GGGCCAGGGA
CCGCTTGGAA CGCTGCGCGC CGACCGCATG CGCGCCCATA ACGCGACGCA GGTTCTGCGT
TTCGACGGCA ATGTAAAAAT GCTGATCCTG CCGGATCAGC CGAGCGAGGG GGACGAATGA
 
Protein sequence
MSEGSGDDPS GGDPATGRRR PAPRSAAPVP PRPVQDRPVN SRYSSFVSLM KVGLPVGAIV 
LLGVVLVYSG VFDSDDRLEV TFREIDTQPS DLRMVSPRLD GVTSDGKPYV ITADNATQDP
ASPNFVTLDN IQADIKFNEE EDWLSLTATS GRYDSEAQTL NLSRQIDIFT TWGYEVHGEE
ATVDFDQGML TSEKEVTGQG PLGTLRADRM RAHNATQVLR FDGNVKMLIL PDQPSEGDE