Gene Plav_0140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_0140 
Symbol 
ID5454562 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp156365 
End bp157699 
Gene Length1335 bp 
Protein Length444 aa 
Translation table11 
GC content62% 
IMG OID640875700 
ProductFolC bifunctional protein 
Protein accessionYP_001411420 
Protein GI154250596 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0285] Folylpolyglutamate synthase 
TIGRFAM ID[TIGR01499] folylpolyglutamate synthase/dihydrofolate synthase 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGACG AAGCCCTCAC ATCGAGTGAT CTCATTCTGG AGAGGCTTAC AAAGCTTCAT 
CCAAAACTCA TCGATCTTTC TCTGGACCGT ACGTGGCGGC TTCTCAATTC TCTCGGCAAT
CCGGAGCGGG CATTGCCGCC TGTGTTTCAT ATAGCCGGGA CCAATGGGAA GGGCTCCGTC
TCTGCCTATC TTCGCGCCGC GCTCGAGGCT GGGGGATACC TTACTCACAG CTATACCTCG
CCGCATCTTG TCCGCTTTCA TGAGCGTATT CGGCTTGCCG GCCGCCCCCG AAGCAGCGCG
ATTTCGGAGC AAGACCTTTC GAGACTCCTC GATGAATGCG AGCGTGCAAA CAATGGGGCG
CCGATCACGT TTTTCGAGAT CACGACAGCG GCCGCACTTC TTGCATTTTC ACGCGCTTCG
GCAGACGCCC TCATTCTTGA GGTCGGCATG GGCGGGCGCC TGGATACAAC AAATGTCGTT
GCCAAGCCGG CCGTCAGCAT CATCACCCCG GTCGATCTCG ACCACCAGGC GTTCCTTGGC
AATACGATCG GATCGATTGC GTCCGAGAAG GCGGGAATTC TTCGACCCGG CGTAGCCGCT
GTCATCGGCC CACAGGTCGA TGAAGCTTTC GCTGCAATCG AGGCCGCTGC GGACAGGGTG
GGCGCACGTC TCTTCATTCA TGGGCAGGAT TTCACCGCGC ATGAGGAAGG CGGCGCGCTG
ACCTATCAGG ATGAGGCTGG ACTCCTCGAC CTGCCCTTGC CGCGCCTCCC CGGACGGCAT
CAGATCGACA ATGCGGGCGT TGCCATATGT GCGCTACGCC AGGCAGGCAT GCTTCCGCTT
GAGCGCGAGG CGATCGCCAG AGGAATGAGG GAAGTGGAAT GGCCGGCCCG GCTGCAGCGA
CTCACGACCG GGCCGATATT CTCGCACCTC CCCCCGGAGG CGGAAGTGTG GCTGGACGGC
GGGCACAATC CGGCGGCGGG GCGTGCGGTT GCGGAAGCAA TGGCGGACCT TGCAGAGCGC
GAACCGGAGG GCGAAGGCCG GCCGTTGATA CTGATTTGCG GAATGCTCGA CACGAAGGAC
GCCGCAGGCT TCTTTGCGCC GTTCCGGGGG CTTGTTTCGC ATGTCGAAAC CATTGCCATC
CCGGGCGCTG ACGCGGGCTT ACCCGCCGAC AGGCTTGCCG CGGCTGCGCA GGAAGCGGGA
CTGGACGCGA CACCCGCCGC ACATCTCGAC CAGGCCCTTG AAAGAGTTGC GGTCGCTGCG
GGAAGAGCAA TGCCGCGCCT GCTCATCTGC GGTTCGCTTT ACCTTGCGGG TCACATTCTC
AAGGAAAACG CCTGA
 
Protein sequence
MSDEALTSSD LILERLTKLH PKLIDLSLDR TWRLLNSLGN PERALPPVFH IAGTNGKGSV 
SAYLRAALEA GGYLTHSYTS PHLVRFHERI RLAGRPRSSA ISEQDLSRLL DECERANNGA
PITFFEITTA AALLAFSRAS ADALILEVGM GGRLDTTNVV AKPAVSIITP VDLDHQAFLG
NTIGSIASEK AGILRPGVAA VIGPQVDEAF AAIEAAADRV GARLFIHGQD FTAHEEGGAL
TYQDEAGLLD LPLPRLPGRH QIDNAGVAIC ALRQAGMLPL EREAIARGMR EVEWPARLQR
LTTGPIFSHL PPEAEVWLDG GHNPAAGRAV AEAMADLAER EPEGEGRPLI LICGMLDTKD
AAGFFAPFRG LVSHVETIAI PGADAGLPAD RLAAAAQEAG LDATPAAHLD QALERVAVAA
GRAMPRLLIC GSLYLAGHIL KENA