Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_0071 |
Symbol | |
ID | 5455559 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 72457 |
End bp | 73650 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640875630 |
Product | response regulator receiver protein |
Protein accession | YP_001411351 |
Protein GI | 154250527 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4963] Flp pilus assembly protein, ATPase CpaE |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 0.623542 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACCGTG TTCTCCTCAT ATGTGGCGAC AAGCCGTTGG CAGCGCAGGT CAAGCAGGCG CTTGATTCGA CGTCGACCGT CATGTCGGCC GATCCTGCAA TCGACAATGT GCAAGATGTG GCCGGACAGT TCCGGCCCGA GATGGTTCTG GTGGATAGCG ATATCCGCCT GGGCGCGCGG ACCGCGTTCG AGCGGCTTTC CATCGTGCGT GAATGGTTCC CCGACCTGCC GATGGTCGTC ATCGGAAACG AGTCGGGTGC TCATCTGATT CTGACCGCCA TGCGTGCAGG CGCACAGGAT TTTCTCGACC GCGATGCGGC GGATGAAGAT GTCCGCAACG TGGTGGCACG CCATATCGCC AGCGGGCGCC CGCGCGGCGG ATCCTCGCAT ATCGTCAGCG TTCTGAGTGC CGGCTCCTGC GAAGAGGATG GCGACTTTGC CGTCAATCTC GGTGTATCCG TGGCCGCCGC GCGTCCGCGA GAGGGGATAC TTCTCGTCGA TCTCGCTTTG CCGGCCAGCA ATACCGCCAT ATCGCTCGGC CTTGAGCTTT CCTTTCGGGT GAAGGAAGCG GTAAAGGAAA TGTCCCGGCT TGACCGTGCG CTTCTCGATT CCGCGCTAGC GCGCTGTCCG CGGTCGGGCC TCTATGTATT GCCTCTCGCG GTTCACGGGG ATGCGGAAGA CTGGCTGGTG AGCGTGCAGG ACCTCCGGGC GCTGCTCGAA ATATGCCAGG CTCTTTATGA CGTGGTGATC GTCTCCTACG GTCCCTTCTC GCGGCAGGAA GAACTTGTCG GCCTTCCCGG CGATGGCGCG CTTTTCTTCC TTCCCTGCAA TCAGCGCTTC ACCTCGATAA AGGGTGCCGC CGAAATGCTC CGCTTCGTGC GGCAGCTTCG GTCCGACAAT GGCGAGCCGG TTCTCGTCGT TCATGAGTTC GCACCCGGCA TGGCGCCGGA CGCCACGGGC ATCAAAAGCG CCGTCGGCGC CAGACAGGCA ATTGAACTTC CCGTGCGCTG GCATCAGCTC GCGGAAAGCG TAAACCGGGG AGAACCGCTC GGGCTCGACA GCTCCACGCC TTACGCACAA AGTCTGTCCC GCCATCTCGC GAACCTCTCC CTTCTGCCGC AACAGGCAGT GGATGACGAG CGCAGACAGC CGATCAAGGC CTGGGCCCGG AAACTTCTCG GAGTGCTGCC ATGA
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Protein sequence | MHRVLLICGD KPLAAQVKQA LDSTSTVMSA DPAIDNVQDV AGQFRPEMVL VDSDIRLGAR TAFERLSIVR EWFPDLPMVV IGNESGAHLI LTAMRAGAQD FLDRDAADED VRNVVARHIA SGRPRGGSSH IVSVLSAGSC EEDGDFAVNL GVSVAAARPR EGILLVDLAL PASNTAISLG LELSFRVKEA VKEMSRLDRA LLDSALARCP RSGLYVLPLA VHGDAEDWLV SVQDLRALLE ICQALYDVVI VSYGPFSRQE ELVGLPGDGA LFFLPCNQRF TSIKGAAEML RFVRQLRSDN GEPVLVVHEF APGMAPDATG IKSAVGARQA IELPVRWHQL AESVNRGEPL GLDSSTPYAQ SLSRHLANLS LLPQQAVDDE RRQPIKAWAR KLLGVLP
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