| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0906 |
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| Symbol | |
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| ID | 5452850 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | + |
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| Start bp | 981934 |
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| End bp | 983280 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 640874666 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_001410413 |
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| Protein GI | 154249588 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000766798 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGGCGAAAG TAAACGTGCT TAATGAAAGA ATAGAATATT CGTTATTTCA CTTAGCATGG
CCTCTCATAG TTTCAAACGC GCTTCAAACA ATTTACAATA TCGTTGATTC TTATTTTCTA
GGTAAGCTTG GGCCTGTACA ATTCTCAGCT TCCACAATTA CTTGGCCCGT TATATTCACA
TTTATCTCAC TTGCCATGGG TTTTTCAAAC GCTGGGATAG CTATTGTCTC ACAAAGTTAC
GGAAAAATGG ATATACAAAA GGTTAAAAAA TCAATGGGGC AGTTATACCT TGTTACGATA
TCCGTTGGTT TGCTGGCTAC CGTACTAGGA ATCGCTTTTG CAAAACCTAT ATTGAACTCT
ATCGCGGGTT CTGAAAGTAG AGATGTTGTC CCGTATGCTT TAAAATACTA CATAGTAGAT
ATGTTAGGTC TTCCACTTGT ATTTATAATC AACAGCACAA CTTCCGCAAT ACGCGCCGTC
GGTGATTCTC AATTTGGCAT GAGAATAACC CTTTACATGA ATCTTGTAAA TATGTTTTTC
GATCCACTAT TGATATTCGG TATTGGACCA TTTCCTAAGC TTGGTGTTGC TGGTGCGGCT
TGGGCTACTA ATATTGGTCG GTTTATAGCA GCTGGAATTT CTTTATACCA TGTTGCTTCT
AAACAAGCTC ATGTGAAAAT ATCGAAAAGC GATTTTAAAC CAGATTGGAA GATTATAGGC
TTGATTTTTA AGCTTGGACT TCCAAGCGCG CTTGGAATGT CAATAACATC GGCTGGTTTC
GCTGTTATTA TGAAATATGT GGCTATGTTT GGTCCCGCCG TAATAAGTGC TTACGGGATA
GGTAATAGGG TTACCAATTT GGTTTCTATG ATATCTTTCG GGCTTGCCGG CGCTGTTTCC
ACAATGGTTG GACAGTTTAT CGGTGCAAAG AGATATAAAG ATGCTGAATA TACAGTTTTA
AAAGCGTTTT ACTGGAATAT AACCATTATC GGCGTGTTAT CTTTATTGAC ATTTATATAT
GGTAAGCAAG TGACTCAATT CTTTATAAAC GATCCAAAAG TTATACAAAT GGGAGAAATC
TATTTCAAAT ACATATCTTT CTCAATGCCC ATCTTTACGG CTTATATGAT TTATAACAAC
GCGCTGATTG GAGCTGGGAA GACGATACTA ACCATGGTTG GCGATATACT CCGTTTATGG
GGAATTAGAA TCCCTATCAT CGCAACATTA TCTCTCACCT TTGGTTTTAA AGGTATCTTC
GTTGGAATGA TAATAAGTAA CCTAATTGTT TTTGTTATAA CTTATCTTTT CTTTAGGCTT
TCCAATTGGA AAAAAAGCGT GGTATAA
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| Protein sequence | MAKVNVLNER IEYSLFHLAW PLIVSNALQT IYNIVDSYFL GKLGPVQFSA STITWPVIFT
FISLAMGFSN AGIAIVSQSY GKMDIQKVKK SMGQLYLVTI SVGLLATVLG IAFAKPILNS
IAGSESRDVV PYALKYYIVD MLGLPLVFII NSTTSAIRAV GDSQFGMRIT LYMNLVNMFF
DPLLIFGIGP FPKLGVAGAA WATNIGRFIA AGISLYHVAS KQAHVKISKS DFKPDWKIIG
LIFKLGLPSA LGMSITSAGF AVIMKYVAMF GPAVISAYGI GNRVTNLVSM ISFGLAGAVS
TMVGQFIGAK RYKDAEYTVL KAFYWNITII GVLSLLTFIY GKQVTQFFIN DPKVIQMGEI
YFKYISFSMP IFTAYMIYNN ALIGAGKTIL TMVGDILRLW GIRIPIIATL SLTFGFKGIF
VGMIISNLIV FVITYLFFRL SNWKKSVV
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