| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0789 |
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| Symbol | |
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| ID | 5452171 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | - |
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| Start bp | 866213 |
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| End bp | 867190 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 640874540 |
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| Product | histone deacetylase superfamily protein |
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| Protein accession | YP_001410299 |
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| Protein GI | 154249474 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAGAACT TGAAGAGTGA TATGTTTTTC TGTGCACAGT TGAATGATGC TTTCGTACCA
AAAAAAGAGA TAGACAACGG AAAATTTATA AGAAATCCAG AAAGGCCTTC AAGATTGAAA
CTTGTGTATG AATTTTTGAA AAAAAATTAT CCGGAAGTTC AACCGTTGGG ATTTTCGGAA
AGTGTTCTTT ACCTTGCTCA TGAGGAAGAT TACATTGAAT ATATTAAACG AAAGTCTTCA
GAGGTAACCC AAGAATATAT TCCAGAAGTA TTTTTTGTTG ATAAGATATT TGACACAGGT
ACACCTATTA ATAAAGAAAC CTACAAAGCG GCTTTTGGGG CGGTTGAGAC AGTTTTAAGC
GCATTAGAAT ATTCTTTATC GAATAAAGTG ATTGTATATG CTCTTACAAG ACCTCCAGGT
CATCATGCTA TGAAAAAGTA TGGTGGTGGT TATTGTTACT TCAATAACGT GGCTATCGCT
GCAAAATATC TTGAAGAAAA AGGTATGCGT GTCGCGATTT TAGATTTAGA TTTTCATCAT
GGAAATGGGA CTCAAGATAT TTTTTACGAC GATCCAAACG TCTTGTATGT TTCAATTCAC
GGTGATCCGA GACAATTTTA TCCATGGTAC AGCGGTTATG AAAACGAAAT AGGTATTGGA
AATGCTGAAG GTACAAACTT GAATATTCCA CTTCCTGGAG GAACAACTTT TGAAGTATAT
AAAAAAGCTT TGGATTTGGC ATATAATAAA ATTCTTGACT ATAAGCCAGA CTTCTTTATA
CTTTCGTTAG GAACGGACAC GCACATCAAT GATCCTGTTG GACATTTTTC TCTTGTTGAT
AAGGACTATA AAGAAATAGG ATTAAGAATA TCTAAATTAA TTGAAAAGAT TGGTAATGGG
ATAATAGTAC ACGAAGGTGG TTACAATAGA TTATCGAACC TTTCCGCGGT GAAAAATTTT
CTTGAGGGAT TGAAATAA
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| Protein sequence | MKNLKSDMFF CAQLNDAFVP KKEIDNGKFI RNPERPSRLK LVYEFLKKNY PEVQPLGFSE
SVLYLAHEED YIEYIKRKSS EVTQEYIPEV FFVDKIFDTG TPINKETYKA AFGAVETVLS
ALEYSLSNKV IVYALTRPPG HHAMKKYGGG YCYFNNVAIA AKYLEEKGMR VAILDLDFHH
GNGTQDIFYD DPNVLYVSIH GDPRQFYPWY SGYENEIGIG NAEGTNLNIP LPGGTTFEVY
KKALDLAYNK ILDYKPDFFI LSLGTDTHIN DPVGHFSLVD KDYKEIGLRI SKLIEKIGNG
IIVHEGGYNR LSNLSAVKNF LEGLK
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