Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_0660 |
Symbol | |
ID | 5452269 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | + |
Start bp | 724233 |
End bp | 724763 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 640874404 |
Product | translation initiation factor IF-3 |
Protein accession | YP_001410172 |
Protein GI | 154249347 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0290] Translation initiation factor 3 (IF-3) |
TIGRFAM ID | [TIGR00168] translation initiation factor IF-3 |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00000367528 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAAACTA TTAAAAACGA AAAAGAAAAG ATTATAAAAA ATGAAGAAAT TCCTTTCACA GAATTAAGAG TGGTGGATGA AGAAGGTAAA GCCGTTGGTG TTATGTCAAA AGCTGCAGCT ATCGATTTGG CTAAGTCAAA AGGACTCGAT TTGATCTTAG TTGCACCAAA TGCTCAACCA CCAGTTGCGA GAATTTTAGA TTATGGTAAA TACAAATACG AATTAGCAAA GCGAGAACAA AAAGCCAAAA GGAACCAAAA AATTATCGAA GTGAAAGAAA TGAAGTTTAG ACCTGTTATA AACGAGCATG ACTATCAGAC AAAGCTTAAA CATATAAAAA GATTTTTAAG TGAGGGAAAT AAGGTTAAGG TTACTGTAAT GTTCAGAGGA AGAGAATTGG CATTTGTTGA GAAAGGTAAA GAGATTCTTG ATAGAATTTC CAACGATATT GCCGATATAG GAAGTGTTGA AAAAGAAGCG AAGATGGAAG GCCGTGATAT GTGGATGGTT TTGAAACCTA AAAATCTTTA A
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Protein sequence | MKTIKNEKEK IIKNEEIPFT ELRVVDEEGK AVGVMSKAAA IDLAKSKGLD LILVAPNAQP PVARILDYGK YKYELAKREQ KAKRNQKIIE VKEMKFRPVI NEHDYQTKLK HIKRFLSEGN KVKVTVMFRG RELAFVEKGK EILDRISNDI ADIGSVEKEA KMEGRDMWMV LKPKNL
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