Gene Fnod_0642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_0642 
Symbol 
ID5452191 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand
Start bp706844 
End bp708235 
Gene Length1392 bp 
Protein Length463 aa 
Translation table11 
GC content34% 
IMG OID640874383 
Productglycosyl transferase group 1 
Protein accessionYP_001410154 
Protein GI154249329 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAGTTT GTATAATAGT CGAAGGAACG TATCCGTACA TAACAGGTGG AGTATCATCG 
TGGATACAAA TGTTAATTGA AAATCTTCCT GGTATTCAAT TCGACGTTGT CCATCTTGCA
CCTTGGAGAT GGAAACGTCC TTTTGGATAT AAAATGCCAA AAAATCTAAA TAGAATATAC
GAATATCTTT TGTTTTCAGA GGGGGATACT TCTAATAAGT TTGTTGATAC GAATAATTTG
GTATTAAACG TTCGTAAGTT GATAGATTTT CCAAGAAGTA AAAAAGCAGA CTTGTTTAGT
GAAATATTAA AAGATGTTGC CGGAAAGAAT TTATACTCGG CTATTTTAAC GAAAGAATTT
TGGGATTTCA TCACCGACAT TTATTCACAT TACTTTGAGA GTGAAGGATT CACAGGTTTT
TATTGGACTG TAATTGGATT TATCATCCCA ATAATTGGAG CCATCCAATC TATTCCTCCA
AAAGCCGACA TATACCATTC AACAACGACT GGTTATGCAT CACTAAGTGC ACTTGTTGGA
AAATACATCT ATAATGGCAA GTTAATAATT ACAGAACATG GCATATATCA CAGAGAAAGA
GAAATTGAAA TAATGAAGTC TAGAAATGTT CAAGAGGTTT ATAAACCTGT ATGGATAGAG
ATATTCAAAT TGATAAGTGA GGTTGCGTAT AAAGAATGTG ATGCGTTAAC TACACTATTT
GAAAAAAACC AGCTCTTTCA ACTTGAATTA AACGCAGATT TTAGTAAGAT GTACGTAATT
CCGAATGGTA TAGATGTAAA TAAATTCAGC AAAGTAAAGA GGATAGAGCA CGAAACGTTT
AATATAGGCA TGGTTGGAAG GGTAGTGCCA ATCAAAGATA TATTAACAGC AATAAAAGCA
TTTAGCATAG TGGCTAAAGA GCATGAAAAT GCAAGACTTT ACATAATTGG GCCCACTGAT
GAAGATGAAG AATATTACCA AAAATGTGTT GAATTAATAG ATTTGCTTGA ACTAAATGAT
AAAGTTATAT TCACTGGAAA AGCGAATGTT CTTGATTATT ATGGTTTAAT AGATGTTCTT
CTTCTCAGCA GTGTCTCGGA AGGTCAGCCC TTAGTACAGC TGGAATCTAT GGCTTGTGGA
ATCCCAGTTG TTGTAACAAA CGTTGGAAAT TGCGCTGAAA TAGCTTTAGA TCCTGATGGA
CAGTCTGGTT TTGTTGTTGA ACCTAAAGAT TACATAAGTA TGTCGGAAAA GATATTAGAA
CTTGCCAAAA ATAAAGATTT ATGGCACACA TTTTCTGAAA ATGGAAAACG AGTTGTTAGA
GATAAGTACA CCCTCTCAAA GATGATAGAA TCTTACCTCG CTTTATATAG AGAGGTGTTG
AAAAATGGTT AA
 
Protein sequence
MRVCIIVEGT YPYITGGVSS WIQMLIENLP GIQFDVVHLA PWRWKRPFGY KMPKNLNRIY 
EYLLFSEGDT SNKFVDTNNL VLNVRKLIDF PRSKKADLFS EILKDVAGKN LYSAILTKEF
WDFITDIYSH YFESEGFTGF YWTVIGFIIP IIGAIQSIPP KADIYHSTTT GYASLSALVG
KYIYNGKLII TEHGIYHRER EIEIMKSRNV QEVYKPVWIE IFKLISEVAY KECDALTTLF
EKNQLFQLEL NADFSKMYVI PNGIDVNKFS KVKRIEHETF NIGMVGRVVP IKDILTAIKA
FSIVAKEHEN ARLYIIGPTD EDEEYYQKCV ELIDLLELND KVIFTGKANV LDYYGLIDVL
LLSSVSEGQP LVQLESMACG IPVVVTNVGN CAEIALDPDG QSGFVVEPKD YISMSEKILE
LAKNKDLWHT FSENGKRVVR DKYTLSKMIE SYLALYREVL KNG