Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_0642 |
Symbol | |
ID | 5452191 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | - |
Start bp | 706844 |
End bp | 708235 |
Gene Length | 1392 bp |
Protein Length | 463 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 640874383 |
Product | glycosyl transferase group 1 |
Protein accession | YP_001410154 |
Protein GI | 154249329 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGAGTTT GTATAATAGT CGAAGGAACG TATCCGTACA TAACAGGTGG AGTATCATCG TGGATACAAA TGTTAATTGA AAATCTTCCT GGTATTCAAT TCGACGTTGT CCATCTTGCA CCTTGGAGAT GGAAACGTCC TTTTGGATAT AAAATGCCAA AAAATCTAAA TAGAATATAC GAATATCTTT TGTTTTCAGA GGGGGATACT TCTAATAAGT TTGTTGATAC GAATAATTTG GTATTAAACG TTCGTAAGTT GATAGATTTT CCAAGAAGTA AAAAAGCAGA CTTGTTTAGT GAAATATTAA AAGATGTTGC CGGAAAGAAT TTATACTCGG CTATTTTAAC GAAAGAATTT TGGGATTTCA TCACCGACAT TTATTCACAT TACTTTGAGA GTGAAGGATT CACAGGTTTT TATTGGACTG TAATTGGATT TATCATCCCA ATAATTGGAG CCATCCAATC TATTCCTCCA AAAGCCGACA TATACCATTC AACAACGACT GGTTATGCAT CACTAAGTGC ACTTGTTGGA AAATACATCT ATAATGGCAA GTTAATAATT ACAGAACATG GCATATATCA CAGAGAAAGA GAAATTGAAA TAATGAAGTC TAGAAATGTT CAAGAGGTTT ATAAACCTGT ATGGATAGAG ATATTCAAAT TGATAAGTGA GGTTGCGTAT AAAGAATGTG ATGCGTTAAC TACACTATTT GAAAAAAACC AGCTCTTTCA ACTTGAATTA AACGCAGATT TTAGTAAGAT GTACGTAATT CCGAATGGTA TAGATGTAAA TAAATTCAGC AAAGTAAAGA GGATAGAGCA CGAAACGTTT AATATAGGCA TGGTTGGAAG GGTAGTGCCA ATCAAAGATA TATTAACAGC AATAAAAGCA TTTAGCATAG TGGCTAAAGA GCATGAAAAT GCAAGACTTT ACATAATTGG GCCCACTGAT GAAGATGAAG AATATTACCA AAAATGTGTT GAATTAATAG ATTTGCTTGA ACTAAATGAT AAAGTTATAT TCACTGGAAA AGCGAATGTT CTTGATTATT ATGGTTTAAT AGATGTTCTT CTTCTCAGCA GTGTCTCGGA AGGTCAGCCC TTAGTACAGC TGGAATCTAT GGCTTGTGGA ATCCCAGTTG TTGTAACAAA CGTTGGAAAT TGCGCTGAAA TAGCTTTAGA TCCTGATGGA CAGTCTGGTT TTGTTGTTGA ACCTAAAGAT TACATAAGTA TGTCGGAAAA GATATTAGAA CTTGCCAAAA ATAAAGATTT ATGGCACACA TTTTCTGAAA ATGGAAAACG AGTTGTTAGA GATAAGTACA CCCTCTCAAA GATGATAGAA TCTTACCTCG CTTTATATAG AGAGGTGTTG AAAAATGGTT AA
|
Protein sequence | MRVCIIVEGT YPYITGGVSS WIQMLIENLP GIQFDVVHLA PWRWKRPFGY KMPKNLNRIY EYLLFSEGDT SNKFVDTNNL VLNVRKLIDF PRSKKADLFS EILKDVAGKN LYSAILTKEF WDFITDIYSH YFESEGFTGF YWTVIGFIIP IIGAIQSIPP KADIYHSTTT GYASLSALVG KYIYNGKLII TEHGIYHRER EIEIMKSRNV QEVYKPVWIE IFKLISEVAY KECDALTTLF EKNQLFQLEL NADFSKMYVI PNGIDVNKFS KVKRIEHETF NIGMVGRVVP IKDILTAIKA FSIVAKEHEN ARLYIIGPTD EDEEYYQKCV ELIDLLELND KVIFTGKANV LDYYGLIDVL LLSSVSEGQP LVQLESMACG IPVVVTNVGN CAEIALDPDG QSGFVVEPKD YISMSEKILE LAKNKDLWHT FSENGKRVVR DKYTLSKMIE SYLALYREVL KNG
|
| |