Gene Fnod_0507 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_0507 
Symbol 
ID5453293 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand
Start bp552440 
End bp553729 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content34% 
IMG OID640874256 
Productrestriction modification system DNA specificity subunit 
Protein accessionYP_001410028 
Protein GI154249203 
COG category[V] Defense mechanisms 
COG ID[COG0732] Restriction endonuclease S subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGAAA ATGTGAAAGT ACTTGAGGGA TGGAAAAGGG TAAAGTTGGG AGAAGTTTTA 
AGTATTTCTA GGATACCTGA TAATGAAAAG GATCCAAATA AGCGAATAAC AGTTAGATTA
TGGAACAAAG GAGTTTTTGC AAGAGAAGTT AGAGAGGTAG AATTGAATAG AGAAAAAGAA
TCTACAATAT ATTATAAGAG AAAAGCGGGA CAATTTATTT ATGGAAAACA AAATTTAGTT
CGTGGTGCTT TTGGTGTTAT ACCACCAGAG TTGGATGGTT ATTGTTCTAC TTCTGATGTG
CCTTCATTTG ATGTAAGTAA AAATTTGGAT GTTTATTATT TAGATTATAC ACTACGCACT
TTATATAAAG CTTTTTCTCT CTATGAAAAA GGTACTGGTT CAAAACGAGT TCATGAAAAA
GATTTTTTAA GTTTTGAAAT ATTCCTACCT CCCATCTTTG AGCAGCAAAA AATTGCTGAG
ATACTTAAAA CTGTTGACCG TGCAATTGAA AAAACGGGCA AAATTATAGA AAAGTACAAA
CGCATAAAGC AAGGTTTGAT GCAAGATTTG CTTACTAAAG GAGTGGTAAG TGAGGGTGAA
GGTGAGAGTG AGAAGTGGAG ATTGAGGAAT GAGAAGATTG ATAAATTCAA GGACTCACCG
CTTGGGAGGA TTCCAGAGGA GTGGGAAGTG GTAAGGTTAG GAGAAACAGG CAGAATTGTA
TCAGGTGCTA CTCCAGATAC TTCTAAGCCT CAATTTTGGA ATGGTGATAT AGTTTGGGTT
ACACCCGATG ACTTGAGCAA GCAAAAAAAG TACATTTATA CATCCCAAAG AAAAATTAGT
AAAGATGGAT TAAATAGTTG TGCTGCTAAG ATTATACCTA GGGATTCAAT TGTTTTGTCA
AGCCGTGCAC CAATAGGATA TTTATCTATT GTTAAAACTA ATTATGCAAC AAATCAGGGT
TGCAAAAGTA TAATCTTAAA CAAAAACTAT TATGATGAAG ATTTTTTTTA CTATTGTTTG
CATCGATATA TAAACAAAAT GATTTCATTG GGTTCAGGAA CTACTTTTAA CGAGATATCT
AAAAGTCAGC TAGCAAAGTT AGAGGTGAAA GTTCCTTGTT TGCTTTCCGA ACAACACCGC
ATAGCTTCAA TTTTATCCCA AATAGATGAA GTCATAGAAA AAGAGCAAGC CTATAAGGAA
AAACTTGAAA GAGTCAAAAA AGGCTTAATG GAAGATTTGC TGACAGGCAA AGTTAGAGTA
AATCACCTTA TTGAGGAGGA AGAAAAATGA
 
Protein sequence
MSENVKVLEG WKRVKLGEVL SISRIPDNEK DPNKRITVRL WNKGVFAREV REVELNREKE 
STIYYKRKAG QFIYGKQNLV RGAFGVIPPE LDGYCSTSDV PSFDVSKNLD VYYLDYTLRT
LYKAFSLYEK GTGSKRVHEK DFLSFEIFLP PIFEQQKIAE ILKTVDRAIE KTGKIIEKYK
RIKQGLMQDL LTKGVVSEGE GESEKWRLRN EKIDKFKDSP LGRIPEEWEV VRLGETGRIV
SGATPDTSKP QFWNGDIVWV TPDDLSKQKK YIYTSQRKIS KDGLNSCAAK IIPRDSIVLS
SRAPIGYLSI VKTNYATNQG CKSIILNKNY YDEDFFYYCL HRYINKMISL GSGTTFNEIS
KSQLAKLEVK VPCLLSEQHR IASILSQIDE VIEKEQAYKE KLERVKKGLM EDLLTGKVRV
NHLIEEEEK