Gene Fnod_0452 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_0452 
Symbol 
ID5452483 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand
Start bp490577 
End bp491683 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content34% 
IMG OID640874202 
ProductROK family protein 
Protein accessionYP_001409974 
Protein GI154249149 
COG category[K] Transcription
[G] Carbohydrate transport and metabolism 
COG ID[COG1940] Transcriptional regulator/sugar kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00127145 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTTGAAAA ATGAAGCAAA GATACTTCTC CAAATCTTGC GAAATAAAAC AATTCGTAGG 
AAAGAACTCG AAGAAATTAT CGATGTTACC CCTTCAACTA TGACTTATTT ACTTGATAAG
CTAAAAGGTT ATATAGAAAT TGAAGAGGGG GATACCAACC TTGGTAAACC CCCTCAATTC
ATTTCGCTTT CAAAAGACGC CTGGAAAGTT TTGTCTATAA GTGTTGGGCG TGAAAAAATT
CGTGCCATAC TTTACAATGC CAAAGGCGAA GAGCTTGAAA GGTCAGAATA TCGTGTTAAA
CACGAAAATC TCTCGAACGA TGGTATAACA AGTTTAGTCA AAAACATAAT TGACAAATTT
TATGATTATG ATAGTATCGG TATAGCTTTT TCTGGTAATG TCGTAGAGGA TAAGGTCTAC
TCTACTATAC TAAAACTTGA TAAGTACGAT CCTGTAAAGT CTCTAAAATT AAAAAACCTT
GGAATTCCTT ATGTTATCAT ATCTGACGTG GAAGCAATAG CCGCATACGA ATCAAAAACA
ACTGGTAATG ATAAAGTTTT CGTACTGAAT TACGGAACAG GTATAGGTGC ATGTTACTAT
GAATATCATG CACTTTTTAC TCGTGATGAA TTCAAAGTTA TACCCCTTGG TCATATTTAT
CTAAATGGTG AAGAAAAATG TTACTGCGGA GCTAAAGGAT GTCTTGAAAC TGTTGCGTCA
GATTACGTTG CGGTGAAAAA TTACTTAGGT CAAAATATTG ATTTCGTTCA TTTTATAGAA
AACGAAGAGA CTTTCTGGGA AGAATTGAAA GATGTAAGAA ACCTTTATAA ACAGAATGAG
GAAGTCGCTG AACGTGTCTA TTCTCAAATT ATTGACAATC TTGCGTTTGT TGTTGGGAAC
ATAAGTATGA TACTTGGACT TGATGAGATA ACTTTGTACG GTGAAGGAAC TTCAACTTGG
TTTGCAAACA AGCTTGAAAA AAGAATAAAT GAATTATCGA AAAATTTCAA CGTTAGAGTA
CGACATGGTA AAGTTATGGA TGTTGTTGAG AGAGGAACTT CCTTGGAAGC TGCCGTTGCT
TTTGTAAGAA AAAAATTTTC AAAATAA
 
Protein sequence
MLKNEAKILL QILRNKTIRR KELEEIIDVT PSTMTYLLDK LKGYIEIEEG DTNLGKPPQF 
ISLSKDAWKV LSISVGREKI RAILYNAKGE ELERSEYRVK HENLSNDGIT SLVKNIIDKF
YDYDSIGIAF SGNVVEDKVY STILKLDKYD PVKSLKLKNL GIPYVIISDV EAIAAYESKT
TGNDKVFVLN YGTGIGACYY EYHALFTRDE FKVIPLGHIY LNGEEKCYCG AKGCLETVAS
DYVAVKNYLG QNIDFVHFIE NEETFWEELK DVRNLYKQNE EVAERVYSQI IDNLAFVVGN
ISMILGLDEI TLYGEGTSTW FANKLEKRIN ELSKNFNVRV RHGKVMDVVE RGTSLEAAVA
FVRKKFSK