Gene Fnod_0452 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_0452 
Symbol 
ID5452483 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand+ 
Start bp490577 
End bp491683 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content34% 
IMG OID640874202 
ProductROK family protein 
Protein accessionYP_001409974 
Protein GI154249149 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1940] Transcriptional regulator/sugar kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.00127145 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTTGAAAA ATGAAGCAAA GATACTTCTC CAAATCTTGC GAAATAAAAC AATTCGTAGG 
AAAGAACTCG AAGAAATTAT CGATGTTACC CCTTCAACTA TGACTTATTT ACTTGATAAG 
CTAAAAGGTT ATATAGAAAT TGAAGAGGGG GATACCAACC TTGGTAAACC CCCTCAATTC 
ATTTCGCTTT CAAAAGACGC CTGGAAAGTT TTGTCTATAA GTGTTGGGCG TGAAAAAATT 
CGTGCCATAC TTTACAATGC CAAAGGCGAA GAGCTTGAAA GGTCAGAATA TCGTGTTAAA 
CACGAAAATC TCTCGAACGA TGGTATAACA AGTTTAGTCA AAAACATAAT TGACAAATTT 
TATGATTATG ATAGTATCGG TATAGCTTTT TCTGGTAATG TCGTAGAGGA TAAGGTCTAC 
TCTACTATAC TAAAACTTGA TAAGTACGAT CCTGTAAAGT CTCTAAAATT AAAAAACCTT 
GGAATTCCTT ATGTTATCAT ATCTGACGTG GAAGCAATAG CCGCATACGA ATCAAAAACA 
ACTGGTAATG ATAAAGTTTT CGTACTGAAT TACGGAACAG GTATAGGTGC ATGTTACTAT 
GAATATCATG CACTTTTTAC TCGTGATGAA TTCAAAGTTA TACCCCTTGG TCATATTTAT 
CTAAATGGTG AAGAAAAATG TTACTGCGGA GCTAAAGGAT GTCTTGAAAC TGTTGCGTCA 
GATTACGTTG CGGTGAAAAA TTACTTAGGT CAAAATATTG ATTTCGTTCA TTTTATAGAA 
AACGAAGAGA CTTTCTGGGA AGAATTGAAA GATGTAAGAA ACCTTTATAA ACAGAATGAG 
GAAGTCGCTG AACGTGTCTA TTCTCAAATT ATTGACAATC TTGCGTTTGT TGTTGGGAAC 
ATAAGTATGA TACTTGGACT TGATGAGATA ACTTTGTACG GTGAAGGAAC TTCAACTTGG 
TTTGCAAACA AGCTTGAAAA AAGAATAAAT GAATTATCGA AAAATTTCAA CGTTAGAGTA 
CGACATGGTA AAGTTATGGA TGTTGTTGAG AGAGGAACTT CCTTGGAAGC TGCCGTTGCT 
TTTGTAAGAA AAAAATTTTC AAAATAA
 
Protein sequence
MLKNEAKILL QILRNKTIRR KELEEIIDVT PSTMTYLLDK LKGYIEIEEG DTNLGKPPQF 
ISLSKDAWKV LSISVGREKI RAILYNAKGE ELERSEYRVK HENLSNDGIT SLVKNIIDKF 
YDYDSIGIAF SGNVVEDKVY STILKLDKYD PVKSLKLKNL GIPYVIISDV EAIAAYESKT 
TGNDKVFVLN YGTGIGACYY EYHALFTRDE FKVIPLGHIY LNGEEKCYCG AKGCLETVAS 
DYVAVKNYLG QNIDFVHFIE NEETFWEELK DVRNLYKQNE EVAERVYSQI IDNLAFVVGN 
ISMILGLDEI TLYGEGTSTW FANKLEKRIN ELSKNFNVRV RHGKVMDVVE RGTSLEAAVA 
FVRKKFSK