| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHAB381_0583 |
|---|
| Symbol | dapA |
|---|
| ID | 5408730 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter hominis ATCC BAA-381 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009714 |
|---|
| Strand | + |
|---|
| Start bp | 534015 |
|---|
| End bp | 534911 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 640870288 |
|---|
| Product | dihydrodipicolinate synthase |
|---|
| Protein accession | YP_001406171 |
|---|
| Protein GI | 154149515 |
|---|
| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
|---|
| TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAATCAA CTCTTATAAA AGGCTCTATG GTAGCCATTA TTACGCCGTT TAAAAATGGC
AAAATCGATG AGGTCGGTTA CGAAAAACTC ATAAAAAGAG AAATTGCAAA CGGCATAAAT
GTGATTGTAC CGGTCGGTAC AACCGGCGAA AGCGCCACGC TTACACACGA AGAGCATAGA
GTTTGTATTG AAATTGCCGT GGATACATGC AAAGGTACGG ATGTTAAAGT TTTAGCAGGA
GCCGGAAGCA ACGCAACTCA CGAAGCCATA GGTTTGGCTA AATTTGCTCA AGATCATGGA
GCGGACGCTG TTTTATCCGT CGCGCCGTAT TATAATAAAC CAACTCAACA AGGATTGTAT
TTGCATTATA AAGAGATTGC AAACTCGGTT GAAATTCCGG TTTTGCTTTA TAATGTTCCA
GGAAGAACAG GTTGCGATAT TAAGGCGGAT ACTGTAATTC GTCTTTTTAG AGAATGCAAA
AATATAATCG GTGTAAAAGA GGCAAGCGGA GATATAGATA GATGTGTTGA TTTGCTTTCT
AGAGAGCCGC ATATGACCGT AGTCAGCGGA GAAGATTCTA TAAATTATCC GATATTGGCA
AATGGCGGAA AAGGCGTGAT TTCAGTCACT GCAAATCTTT TGCCGGATTA TGTCGCAAAA
CTTTGTGATT ACGCACTAAA AGGCGATTTT GTAAAATCTC GCGAGATAAA CAATGAACTT
TATGAATTAA ACAAAATTTT ATTTGTAGAG AGCAATCCTG TGCCTATAAA AGCGGCGATG
TATATTGCAG GACTTATCGA AACGCTTGAA TATCGTTTGC CGCTTTGTGA GCCTAGCAAA
GAAAATTATA AAAAAATCGA AGAAACAATA AAAAAATACA AAATTAAAGG GTTATAA
|
|---|
| Protein sequence | MESTLIKGSM VAIITPFKNG KIDEVGYEKL IKREIANGIN VIVPVGTTGE SATLTHEEHR
VCIEIAVDTC KGTDVKVLAG AGSNATHEAI GLAKFAQDHG ADAVLSVAPY YNKPTQQGLY
LHYKEIANSV EIPVLLYNVP GRTGCDIKAD TVIRLFRECK NIIGVKEASG DIDRCVDLLS
REPHMTVVSG EDSINYPILA NGGKGVISVT ANLLPDYVAK LCDYALKGDF VKSREINNEL
YELNKILFVE SNPVPIKAAM YIAGLIETLE YRLPLCEPSK ENYKKIEETI KKYKIKGL
|
|---|
| |