| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHAB381_0475 |
|---|
| Symbol | secF |
|---|
| ID | 5408806 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter hominis ATCC BAA-381 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009714 |
|---|
| Strand | - |
|---|
| Start bp | 434150 |
|---|
| End bp | 435121 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 640870180 |
|---|
| Product | preprotein translocase subunit SecF |
|---|
| Protein accession | YP_001406063 |
|---|
| Protein GI | 154148803 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0341] Preprotein translocase subunit SecF |
|---|
| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAATAT TTGATAAAGG CAAAATTTAT AATTTTATGA AATTTCGCTA CGCAGCATTT
GCGTTTTCTG CGATTTTAAT GTTGGGTTCT ATGTTTTTAC TGTTTTTTCA AGGTTTTAAT
TACGGTATTG ATTTTAGCGG CGGAACGCTT ATTCAAGTAA AATACGATCA AAAAGCCGAT
TTGGCGCTAA TTCGTAAAAC CATAAATAAA GTTGATTTTT TAAAAGATGC AGCTGTTACG
GAATTTGGAA GCGACCAGGA AATCGTTATT CGCTATTCAA GTGCACATGA TAAGGTCCAA
GAAAATCTGA ATGCAAAAAT GAATGAAATT TTAAAACCGA CAGGAAATTT TGAAATTAGA
CGTGTAGATG TCGTAGGACC TAAAGTAGGA GATGATCTGA AACAAAAAGG AATTATGGCT
GTAGCCGTTT CTTTGGTGCT TATTTTAATT TATATAGCAG TGAGATTTGA ATGGAGATTT
GCAATTGCGG CAATTTTTTC GGAATTTCAC GATGTAATAA TTACAATAGG AGCAATAATC
TTATTTAAAA TAGATTTCAA TCTTGAAATT TTAGCCGCCA TTCTTACAAT CTTGGGATAC
TCGCTGAATG ATACAATAAT CGTATTCGAT AGGATAAGAG AGGGCATAAA AGAAAGCAAA
TTCGCAAAAA TAAATGACGT CATAAACGAA GCCGTTTCAG CGACACTTTC ACGTACAATT
TTGACATCGT TCACAACTTT GATAAGTGTT GCTATTTTGC TGCTTTTCGG TGGAGATATG
ATTTATAATT TCAGCTTTGT AATGATGATA GGTATAGTAT TTGGAACATT CAGTTCAACT
TTTATCGCCG CACAAAGCTT AATTTGGTTT AAATTTGACG TCAACAAATA CCGTGAGTTT
TTAGCGGAAA AACAACGCAA GATAAGAGAA AAAGAAAAAA TTCGTGCAAT GTATGAAAAA
GGCATGGTTT AA
|
|---|
| Protein sequence | MQIFDKGKIY NFMKFRYAAF AFSAILMLGS MFLLFFQGFN YGIDFSGGTL IQVKYDQKAD
LALIRKTINK VDFLKDAAVT EFGSDQEIVI RYSSAHDKVQ ENLNAKMNEI LKPTGNFEIR
RVDVVGPKVG DDLKQKGIMA VAVSLVLILI YIAVRFEWRF AIAAIFSEFH DVIITIGAII
LFKIDFNLEI LAAILTILGY SLNDTIIVFD RIREGIKESK FAKINDVINE AVSATLSRTI
LTSFTTLISV AILLLFGGDM IYNFSFVMMI GIVFGTFSST FIAAQSLIWF KFDVNKYREF
LAEKQRKIRE KEKIRAMYEK GMV
|
|---|
| |