Gene CHAB381_0013 details

Gene Information

• Locus tag: CHAB381_0013
• ID: 5409212
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter hominis ATCC BAA-381
• Kingdom: Bacteria
• Replicon accession: NC_009714
• Strand: +
• Start bp: 12448
• End bp: 14496
• Gene Length: 2049 bp
• Protein Length: 682 aa
• Translation table: 11
• GC content: 30%
• IMG OID: 640869736
• Product: mechanosensitive ion channel family protein
• Protein accession: YP_001405635
• Protein GI: 154148112
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0668] Small-conductance mechanosensitive channel

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGTTTA TAATAAAATT TATTTCAATA TTTATTTTAG CAGTTTTTGC AAATGCTGAA 
AATAACACTA CCGGCGATAA CAATATAAGT GATGTAAATA AAACCGAGAT AAAGCAGGAA 
GTCGTTCAGA TGCTAAATCA CGGCGAAAAT AATGAAACCG ATGAAGTTGT GGATATCATC 
GCGGAAAAAA TAGCAAACTC GCAAGCAAAT GAAAATAATT TTTCCGATTC ACCCGCTTTA 
ATTTCCGTTT TAAAAGAGTT GGCTGAAATT AACAAGCAAA TTTTACTGCT TAGTGGTCAT 
AATGATTCAA ATGCCACTAT TAGCGAACTT GCAACATTGA ATGAAAATAA AAGAAAGTTA 
TTGGAACAAA TTCCGATGGC AATCACGAAT CAAACTATCA GCCGCGAAAA TGTCATAGAA 
TATACAAAAA AGAAAGAAAG AGTCGAGCGA ATTTTAGCCA GAAATAAAAA TCAATATTCT 
TACGAATATA TAAAAACGAA AATTTTGGCT AATTCAATGC GAATAAACGA GATATTTTTT 
ACTACTTTTA TAAAAACTGA AAATCTTTTT ATAAACGGTG CAAAAAAAAG TGAGCTTCAA 
AATGAATTCA GAAAAGCTTT ACTTGATTTG GAAACCGAAT ATGCGACATT GTATGATTAT 
ACGGATGAAA TTTTAAATAA AAAAAATTTG CTCAACAGCA AACAAAAAGA TGAGATAAAC 
GAAACTCTTG AAAAATTTAA AGTATATAAA ATAACTTCCG ACGAGGTTTT GAATTATCTG 
CTTCAAAACA GCGATTTACT CGCGAGCAAT ATTTTATTTA CAGGCTTAAA TTTAAAGCAA 
ATACTTAATT ATATTAATGA TAAAATGCCG TTTAATACAA ACAAAATCAA TGCCGGAAAA 
TGGATCTTGA TTATAATCAT TACACTATTT TTCTACTCTT TGCGTAAATT TCTGGCAAAA 
ATAATTTATT TTATATTTAA AATTTTTAAT AAATCCGGTG ACAGCGAGGC TATAAAAATA 
CAAATTATTG ATATTATCAA AAAGCCTTTG GGCGTGCTTT TAATCGCTTA TGCGATAGAT 
ATCTGCTCCG CTATTTTTTA TTATCCTGCG CCTGTTCCTA TAAAATTCGG AAACTTTTTT 
TCAATTATTT ACATAATTCT TTATGCGTGG CTCATCATAA AAATTTTAGA TGGATATGGA 
ATAATGCTTC TTGGCTCAAT CGCTAGAAAA AGCGGTAGAA AAGAGGTGAT AAATTTAATC 
ATAAAAATTT TATATATTAT AGTCGTCATT ATAGCGCTTT TATTTGTGTT AAGCAGACTC 
GGATTTAATA TTTCAGCACT TATCGCTTCA CTAGGTATCG GCGGACTTGC TATCGCACTT 
GCGACAAAAG ATATAATTGC GAATTTCTTT GCTTCAATTT TACTGCTTTT TGATAATTCA 
TTCTCTCAAG GAGACTGGGT AGTAATTGGC GATGTAGAAG GAACTGTAGT AGAAACAGGA 
CTTAGAAAAA CTTTGATAAG AACATTTGAC AATGCTCTTG TATCTGTTCC GAACTCAAAA 
ATAATGGAAA ACAACATCAA AAACTGGAAT CGCAGAAAAG TCGGAAGAAT AATAAAAATT 
ACGGTCGGTC TCAGTTACAG TTCTACTGCC GAGCAGATTA AAAACTGCGT AAATGATATC 
GAAGCTATGC TGTTAAATCA TCCTGATATT GCTCAACCGA AAGATAACGC ACTAAATCAA 
AATAATCTTA AAATGTTTTA TAAACAAAAT ATGGTTTCGG TTGACGATTT AGCCGGTTAT 
AAAAATACTT TGTATGTCTC ATTGAACGAA TTTTCCGATT CGTCTATAGA TATTTATATT 
GAATGCTTTA CAAAGACGAT AAAACGTGAT GAATATTATA GAGTAAAACA AGATATAATG 
ATAAAAATTA TGGAAATTGT AGAGAAATAT GACACTGAGT TCGCTTTTCC ATCTCAAAGT 
CTTTATATCG AAAAATTTCC AAAAATTGAA ATTAAAAACC CAAAAGGAAC AGAACATGAA 
AATGTATGA 

 

Protein sequence

MKFIIKFISI FILAVFANAE NNTTGDNNIS DVNKTEIKQE VVQMLNHGEN NETDEVVDII 
AEKIANSQAN ENNFSDSPAL ISVLKELAEI NKQILLLSGH NDSNATISEL ATLNENKRKL 
LEQIPMAITN QTISRENVIE YTKKKERVER ILARNKNQYS YEYIKTKILA NSMRINEIFF 
TTFIKTENLF INGAKKSELQ NEFRKALLDL ETEYATLYDY TDEILNKKNL LNSKQKDEIN 
ETLEKFKVYK ITSDEVLNYL LQNSDLLASN ILFTGLNLKQ ILNYINDKMP FNTNKINAGK 
WILIIIITLF FYSLRKFLAK IIYFIFKIFN KSGDSEAIKI QIIDIIKKPL GVLLIAYAID 
ICSAIFYYPA PVPIKFGNFF SIIYIILYAW LIIKILDGYG IMLLGSIARK SGRKEVINLI 
IKILYIIVVI IALLFVLSRL GFNISALIAS LGIGGLAIAL ATKDIIANFF ASILLLFDNS 
FSQGDWVVIG DVEGTVVETG LRKTLIRTFD NALVSVPNSK IMENNIKNWN RRKVGRIIKI 
TVGLSYSSTA EQIKNCVNDI EAMLLNHPDI AQPKDNALNQ NNLKMFYKQN MVSVDDLAGY 
KNTLYVSLNE FSDSSIDIYI ECFTKTIKRD EYYRVKQDIM IKIMEIVEKY DTEFAFPSQS 
LYIEKFPKIE IKNPKGTEHE NV