Gene Mboo_2342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_2342 
Symbolpgk 
ID5411035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp2407716 
End bp2408930 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content60% 
IMG OID640869598 
Productphosphoglycerate kinase 
Protein accessionYP_001405499 
Protein GI154151881 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0126] 3-phosphoglycerate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.480216 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGATCG GTACCCTCCC GGATCTGGGG GCAGAAGGAA AAACGGTGCT TCTCCGTCTT 
GACCTCAACT CCCCCATCGA TCCCACCTCC CACCTTATTT TGGATGACAA ACGGTTCCGC
GAGCACCTGC CCACGGTACG TGCCCTTTCG GATTCCCGGG TTGTGATCGT CACCCACCAG
AGCCGGCCCG GGAAAAAGGA CTTTACCACG CTTGAGGCCC ACGCAGGCAA GCTCGAAGAG
CTCCTGGGCA CTCCTGTTAC CTACATTGAC AGCATCTTCG GGAAACACGC CAGGGATGCC
GTGCAGGCCT CAAAGCCCGG CGATATCCTG ATGCTCGAGA ACGTGCGGTT TGCGGCTGAA
GAGAACCTCA CGATGAAACC TGAGGACGCA AAAAAGACGC ATATCGTCAG GCGCCTCTCA
TCCATGGCCG ATGTCTTTGT CAATGACGCG TTCGGGACTG CCCACCGCTC CCAGCCGACC
GTGGTCGGCC TGCCGCTTGC CATGCGTTCC GCTGCCGGCC TTTTGATGGA ACGAGAGGTT
GCCACCCTTT CAAAAGTACT CTCGGGTGCC CCCCGCCCGG TCACCATGGT GCTTGGCGGC
ACCAAGATCG ATGACTCGAT CGAGGTTGCC GCCCACGTGC TTGCAAACGG CATTGCCGAT
AACGTAATCG TGATCGGGGT CGTGGCCAAT GCCTTCTACA TCGCTGCCGG GTACGATATC
GGCAAACCCT CCACCCAGCT CATCGAGCAG CTGAAGTACC AGGGCGAGAT AGCAAAGGCC
AAAGCGATCC TTGATACGTT CGGCGACCGG GTGATCCTGC CCTCTGCGGT TGCCGTGCGG
CAGAACGGGC GGCGTGCCGA ATACCCGGTA GAAAAGATCC CGTTCGATGC ACCGGTCATG
GATCTCGGCA TGGATGCCCT CCCGGCCCTT GTTTCCACCC TGAAAAATGC CGGGACCGTG
GTCTTTAACG GCCCGGCCGG AGTCTTTGAG GACCCGGACT TTGCCACAGG CACCTACGAG
CTCCTCCGGG CCGCATCGAA AGTCGGGTTC TCGGTCGTGG GCGGCGGGCA CACCGCAGCC
GTGATCGAGA AGCTCGGGAT AGAAAAAGAG TTCACCCACA TCTCAACAGG TGGCGGGGCC
TGCATCGAGT TTCTGACCGG CAAAAAACTC CCGGCAGTCG AGGCGCTCGA AGAGTCGTAC
CAGCTCTTCG GGTAA
 
Protein sequence
MPIGTLPDLG AEGKTVLLRL DLNSPIDPTS HLILDDKRFR EHLPTVRALS DSRVVIVTHQ 
SRPGKKDFTT LEAHAGKLEE LLGTPVTYID SIFGKHARDA VQASKPGDIL MLENVRFAAE
ENLTMKPEDA KKTHIVRRLS SMADVFVNDA FGTAHRSQPT VVGLPLAMRS AAGLLMEREV
ATLSKVLSGA PRPVTMVLGG TKIDDSIEVA AHVLANGIAD NVIVIGVVAN AFYIAAGYDI
GKPSTQLIEQ LKYQGEIAKA KAILDTFGDR VILPSAVAVR QNGRRAEYPV EKIPFDAPVM
DLGMDALPAL VSTLKNAGTV VFNGPAGVFE DPDFATGTYE LLRAASKVGF SVVGGGHTAA
VIEKLGIEKE FTHISTGGGA CIEFLTGKKL PAVEALEESY QLFG