| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_0939 |
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| Symbol | |
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| ID | 5410056 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | - |
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| Start bp | 925798 |
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| End bp | 928236 |
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| Gene Length | 2439 bp |
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| Protein Length | 812 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640868165 |
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| Product | SMC domain-containing protein |
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| Protein accession | YP_001404100 |
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| Protein GI | 154150482 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0419] ATPase involved in DNA repair |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0924914 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.567341 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCTTG ACCGGCTCGA ACTCACCAAT TTCAAAAGGT TCCGGCACGT GGAGATCAAG
TTCCAGGACG GCATTACCGG CATTCTCGGG AATAACGGCA CGGGAAAGTC AAGCCTTGTC
ACCGCGATCT TCTTTGCGCT CTATGGCGTA AAAGCGACCG GGATCTCCGC AGATTACATT
GTTTCAGGTT TTGCATCCCC AAAAGAGAAG TGCGAGGTTA TCCTCGAATT CCGGATCGGG
GGCGACACCT GCAAGATCAT CCGGACTTTT AAGAAGGGAA AGACCGTCAC CCATGAGGCA
GAGTTCTACC GGAACCGGCA GCTGGTTGCA AAAGAAGTGA GCCCGGTCGA GGCCGAAGTG
AAACGGACGC TCGGGATGGG CCCGGTAGAT TTCAAAAATA CGATCTACGC AGCCCAGAAA
GACCTCCTCA CCCTGCTCGA CAACACGCCG ACAAAGAGGA AAGAGTGGTT CCAGAAAGCG
CTCGGGATCG ATTATCTCAA AACCGAGAGC GACGCGGTCT TAAAAAAACA GGCCGATGAA
AAGGCTGCCG GACTCCAGCA TAAGGAGGGC GAGCTTGCGG CTCTTGCCGG CCGGCAGAGC
GAAGAGGAAC TTGCACGCCT TAAGGCCTCC CTTCTCACAT TCACTGCCGC AATTGCAGGG
CACGAAAAAC AGAAAGCCAT TCTCACCAAA CAGCGGGATG AGATCGAGGC CGGGCTCAAA
ATCCTTGCCG AGAAGAAGGC CGCACACGAC CGGCTCGTGC AGCAGCAGCT GACAGTAACA
GGAGAACTTG CCCGGGAGAC CGCCCAGCAG AAGTCCGTTG AATCGGCGCT TGCCCTGCTC
AAAAACGACG AGGCGGAGTA CCACGGCCTC GAAAAGGCAG CCGGGTCGTA CGCGGAGGTC
CGGGCCCGGC TCGATATGCT CGCGCAAAAA AAAGCCGAAC ACCAGCGGCT CACCGGCGAA
GCTGGTTTTG CAAAAAAGCA GGCCGCAGAA ATTTCCGCCC GGATCGAAAC GGAAAAAGCC
CGGCTTGCCG CACTTGCAAA GGACGCTGAT GAGTACGCCC GGCTTGCCGC CACGGTCAGG
AAAGACCTTG GCGCCGGCCC GGAGCTAACC GACGACCGGC TCGAAACCGC GGTGAACTTC
CGGCTCGCAG AACTCATGAA GCGGACCGGC ACCCTTGCGG CACGGCAGCA ACAGTACAAA
GAAGAAAGGG AGAAGATTGC AGCCGACCGG GCAACAATCG CCGGGGCCGG GCCGGACGGC
ACCTGCCCGC TCTGCCGGCA GAAACTCGGG GAGCACTATG GCGATCTCGA AAAGGAGTTT
ACCGCACGAC TCCGCGAACT GGAGGACCGG GCCGTTGCTG ACCTCGCAAA GCAGGAGACC
CTTGAAAAAG AGAAGGCCGC AATCGAAGCG CTGCGGCCGG TCCTTGAAAA GCTCCGGACC
CTTGCGGCAA ACCTGAAGCG CCGGGCCGAG TCCGAGAGCA CGATTGCCGA CCTTGCCGCC
CGGCTCAGTG CAAAGCAGCG GGAGGAGCAG GCCCATGCGG ATGCTCTTGC AACACTTGCG
TTCGATGCAC CGGCATACAG CGCAGCAGAG CAGGCAGAGG CAGCGGCACG AAAGGCGCAG
GCCCGGTTTA CCGAGCTCGG GAAGAAGATC GGGCAGGCCG TCTCCCTAAA GCAGCAGCTT
GCCGGGCTCA CCGAGCGGAT TGCACAGCGC AATGCCGAGG TAAAAACGCT GGAGCAGGCA
ATCACAGGGG CACCGTATAA CCCACAAGAG ACCGCTGCGG CCGAGGACCG GAAGAATGCA
GCCGACACCG CTCTCCGGGA CAACGATGTC GCCATTGCAA ATGCAAAAAG AGACCGGAAA
TTTGCCGAAG AGAAGATCGC CGACTACCAG CGCACGGCAG AGCAGATCGT CCTCCTGCAG
AAGCAGGTCA CGGAGCTCAA AGACGAGATC GAACTGTTAA AGCTGACCCG TGCCCTCATT
GCCGAATACG TGGTGTACCT CATGCAGGTC GTGCGGAGCC GGCTCGAAGG AGAGGTAAGC
CGGATCATCG CGGAGATTAC GGGCGGCAGG TACGAGCAGG TGCTGCTTGA CGAGGACTTC
AACCTCCTCG TGCGTGACGT GGACAACGAT TACCCGATTG ACCGCTTCTC GGGTGGCGAG
CAGGACGATA TTGCAGTCGC ATTGCGGATC GCCCTCTCGC GGTACTTAGC GGAGCTCCAC
CAGGTGCATG AATCCACCTT CCTCATCTTC GATGAAATAT TCGGGAGCCA GGACGAGGAA
AGGAGAAACA ACCTGCTCAC GGCGCTGCGG ACGCAGGAAT CGCGCTTCCC GCAGATCCTC
CTCATCTCCC ACATCCCGGA GATCCAGGGA GAGTTCGCAA ACACGCTGGT CGTGGAGATG
GGCCCGGACA ATGCAAGCCG GATCCGGGAG GTTGAGTGA
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| Protein sequence | MILDRLELTN FKRFRHVEIK FQDGITGILG NNGTGKSSLV TAIFFALYGV KATGISADYI
VSGFASPKEK CEVILEFRIG GDTCKIIRTF KKGKTVTHEA EFYRNRQLVA KEVSPVEAEV
KRTLGMGPVD FKNTIYAAQK DLLTLLDNTP TKRKEWFQKA LGIDYLKTES DAVLKKQADE
KAAGLQHKEG ELAALAGRQS EEELARLKAS LLTFTAAIAG HEKQKAILTK QRDEIEAGLK
ILAEKKAAHD RLVQQQLTVT GELARETAQQ KSVESALALL KNDEAEYHGL EKAAGSYAEV
RARLDMLAQK KAEHQRLTGE AGFAKKQAAE ISARIETEKA RLAALAKDAD EYARLAATVR
KDLGAGPELT DDRLETAVNF RLAELMKRTG TLAARQQQYK EEREKIAADR ATIAGAGPDG
TCPLCRQKLG EHYGDLEKEF TARLRELEDR AVADLAKQET LEKEKAAIEA LRPVLEKLRT
LAANLKRRAE SESTIADLAA RLSAKQREEQ AHADALATLA FDAPAYSAAE QAEAAARKAQ
ARFTELGKKI GQAVSLKQQL AGLTERIAQR NAEVKTLEQA ITGAPYNPQE TAAAEDRKNA
ADTALRDNDV AIANAKRDRK FAEEKIADYQ RTAEQIVLLQ KQVTELKDEI ELLKLTRALI
AEYVVYLMQV VRSRLEGEVS RIIAEITGGR YEQVLLDEDF NLLVRDVDND YPIDRFSGGE
QDDIAVALRI ALSRYLAELH QVHESTFLIF DEIFGSQDEE RRNNLLTALR TQESRFPQIL
LISHIPEIQG EFANTLVVEM GPDNASRIRE VE
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