| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3846 |
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| Symbol | hupA |
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| ID | 5386363 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 4333321 |
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| End bp | 4333596 |
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| Gene Length | 276 bp |
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| Protein Length | 91 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640866871 |
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| Product | transcriptional regulator HU subunit alpha |
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| Protein accession | YP_001402797 |
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| Protein GI | 153947801 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 0.219693 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATAAGA CTCAACTGAT TGACGTAATC GCGGACAAAG CGGACCTTTC TAAGGTACAA
GCTAAAGCTG CTCTGGAATC CACACTGGCT GCAATTACCG AATCTCTGAA AGAAGGGGAT
CCAGTACAAT TGGTTGGTTT TGGTACCTTC AAAGTAAACC ATCGTAATGA GCGCACTGGC
CGCAACCCAC AAACGGGTAA AGAAATCAAA ATTGCTGCCG CTAATGTACC CGCGTTTGTT
TCTGGTAAGG CACTGAAAGA CGCTGTTAAG TCATAG
|
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| Protein sequence | MNKTQLIDVI ADKADLSKVQ AKAALESTLA AITESLKEGD PVQLVGFGTF KVNHRNERTG
RNPQTGKEIK IAAANVPAFV SGKALKDAVK S
|
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