Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_2056 |
Symbol | |
ID | 5388305 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 2369328 |
End bp | 2370395 |
Gene Length | 1068 bp |
Protein Length | 355 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640865041 |
Product | putative spermidine/putrescine ABC transporter, ATP-binding protein |
Protein accession | YP_001401029 |
Protein GI | 153947691 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 0.938805 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGAAAC TGGTACTGGA GCAGGTGACC AAAACATTTG GCGATTTCTA CGCCGCCAGG GAAATATCTT TTTGCGCTGA AGAAGGCGAG TTCGTAACGC TGCTAGGGCC AAGTGGCTGC GGCAAAACGA CACTGCTGAA GATGATCGGT GGCTTTCACC AGCCGGATAG CGGGCAGATC CTGATTGGGG GGAAATCGGT CAACAGCCTA CCGCCAGATA AACGTAATAC CGCCATGTGC TTCCAGTCCT ACGCCTTGTT CCCGCATCTC AACGTGTCGC ATAACATCTG TTTCGGGCTG AAGCAGAAAA AAGTCGCTAT CAATGAGCAA TTGGCGCGAC TGGCAGAGGC ACTGAAGCAG GTGGGGCTAG AAAGCCAACG CCTGAAAATG CCCGCCCAAC TCTCCGGCGG CCAGCAGCAG CGCGTGGCAC TGGCCCGAGC GATGATCACC CGCCCAGACG TGATCCTGTT TGATGAACCG CTCTCTAATC TTGATGCTAA ACTGCGCGAA AGCGTGCGTT TTGAGATTAA AGAACTGCAA CGTCAGTACC ATCTCACCTC TATTTACGTC ACCCATGATC AGGCAGAAGC GCTGGCGATG TCGGACAAAA TCGTGGTGCT CAACGCAGGT AATGTGGAGC AAATCGGGGC ACCTGAGGAG ATTTACTACC GCCCGACCAG CCGCTTTGTG GCGGATTTCA TCGGCGCGGC CAATATCGAC ACAGCTCATA TTACTGCTGC AGAGCAACCC GGCTCTTGGC GAGTACGCTG CGCCATGGGC GAATTTTACG TCCATTCAAC CACTCCGCCG CGTGCAGAGC ACTGCTATAT CTGCTGGCGG CCGGAAGATG TGCAATTTGT CGGCCCTCAT CAGAGCGGCG ACAACCACTT TACCCTGACA CTCGAAAAAA TGGCGTTTAT GGGCAATCTC ACTGAGGCCT GGGGCCATAA TGATGCGGGG CTGTCGGTAC GTCTGCAACT GATTAAAAAA CCTCCGGTGG CACTTGGCGG GCGGGCGTGT TTCCGCCTGC CGGAGAACGC TATTCACTTT TTGGAGCCGG TATCATGA
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Protein sequence | MSKLVLEQVT KTFGDFYAAR EISFCAEEGE FVTLLGPSGC GKTTLLKMIG GFHQPDSGQI LIGGKSVNSL PPDKRNTAMC FQSYALFPHL NVSHNICFGL KQKKVAINEQ LARLAEALKQ VGLESQRLKM PAQLSGGQQQ RVALARAMIT RPDVILFDEP LSNLDAKLRE SVRFEIKELQ RQYHLTSIYV THDQAEALAM SDKIVVLNAG NVEQIGAPEE IYYRPTSRFV ADFIGAANID TAHITAAEQP GSWRVRCAMG EFYVHSTTPP RAEHCYICWR PEDVQFVGPH QSGDNHFTLT LEKMAFMGNL TEAWGHNDAG LSVRLQLIKK PPVALGGRAC FRLPENAIHF LEPVS
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